LOCUS ADH87637.1 1013 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 double-strand break repair protein AddB protein. ACCESSION CP002026-300 PROTEIN_ID ADH87637.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_0303" /inference="protein motif:TFAM:TIGR02786" /note="TIGRFAM: double-strand break repair protein AddB; KEGG: azc:AZC_0713 hypothetical protein" /transl_table=11 /db_xref="InterPro:IPR014153" BEGIN 1 MSRPDPNLLT IPASAPFLAV LADALLDGRL VEGFAPRHDP FALASATVFL PTRRAGRLLA 61 EALRARMESG VTLLPRIVPL GDVDEDSLAF AESFTDPPRA VPGMTRRLAL ASLVRRWRRL 121 LAGDDGRVAV AAGPGAEFAL ADALAHLIDE MAAQQVPWEK LDTLVPGQHD LYWDMALDFL 181 KIAREFWPAL LDELGAVDAS VRRDRLIAAE AERLRAAPAG PVIAAGSTGS MPATARLLAA 241 VAHLTDGCVV LPGLDTDLDA RSWDHLTDDE APAPSHPQYG LALLLKAHMR VGRDAVRSLA 301 PPAPHGRERL LSEALRPVAS TEAWASLAER LGAAEIDAAL AEVSVIEADD AREEALAIAV 361 ALREALEEPG RSAALVTPDR DLARRVAAEL LRFEVAIDDS AGEPLSESAP GRFARLVADA 421 CDAELAPVPL SALLRHPLAR FGLERGALDQ AADALELMVL RGPRPEAGAD GLVRAVAGFS 481 PGLHHSSDPR AAIDTDRQAL AAGLAERIAR AFGPLLALGA GEHPFATLLE AHRAAVAAAW 541 SAEDGGAAED AIALAELSKT FEAMAEGASE APVMRLADYA AALPLLLADR PVRPPLLPGA 601 RLRILGPLEA RLVSVDRMVL AGLVEGTWPS AVRTDPWLSR PMRAALGLEA PERRIGLSAH 661 DFAQGCGAPE LILSHPRKLG GAPTVPSRFL QRLEAVSGEA RWKMAKLRGD RFRRLAALIE 721 EAPAASRIAR PEPAPPVELR PKRLSVTEIE TWLRDPYTIY ARHVLRLRPL DMLDEAPGAA 781 ERGSAIHDAL GAFAQAFPEA LPAEPEAGLL AFGREAFREL EAFPAEYALW WARFERLVPR 841 YIGWERARRA DTRRVFAELG GRMALAGGRF ALTGRADRIE QLREGGLAII DFKTGAVPTA 901 KQTAAHYSPQ LPLEAAMAAA GGFRDLPAEG AAALTYVRLG TSELKEVGAV DRDETAFGLA 961 ASTLERLEQL IATFEDPSRG YASLARPMFR GRFGDYDHLA RVKEWSTGGE GEE //