LOCUS ADH87634.1 839 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 integral membrane sensor signal transduction histidine kinase protein. ACCESSION CP002026-297 PROTEIN_ID ADH87634.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_0300" /inference="protein motif:PFAM:PF02518" /note="KEGG: met:M446_0500 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein" /transl_table=11 /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR009082" /db_xref="InterPro:IPR018228" BEGIN 1 MAHPAGMGGE RNQGGRVPQV RPGRRLLRPL FTGLAFAAPI APASAAPASD VFAVLAVQDP 61 SVLIGLALVV GLIVFATTTA IVHLRYRRQS LRREMAAFGE ISRLEAQIDE ARALLMAEPQ 121 IVVVWRDPAA DPEIIGNTPA FTGVAAPARI LAFGSWLTPA SAREIEAAVD RLRGRGTPLA 181 ATLATQDGRF VEADGRPVGA AVVLRLRDIT GVRLDQAQLE AAYRALDAES SALRTLLDAL 241 PAPAWVDGED GRLRWSNAAY AHAVEARDAS DAASRGLMLL DQQSRTQAEK AHAASLPFKA 301 RLPVVVAGTR RVLDVLEVPA GGGAAGIALD ATEAEVVRAE LAQVVGAHRR TLDQLATAVA 361 IFGADQRLVF HNAAYARLFD LDAAFLDDRP TDGAVLDRLR AARRLPEQAD FRLWREELHA 421 AYRAIEPREH WWHLPGGRTL RVVTAPNPEG GITYLFDEVT ERLALESRFN SLTRIQSETL 481 DALAEAVAVF GSDGRLGLVN SAFRRLWQLD AAMLDAHPHI DAVAAACRPL TADAAVWARL 541 TATVTGIEAR MPTEFRMERN DRTILDGSTQ PLPDGATLVT LRDVTDSVNV ERALVERNDA 601 LVAADHLKST FVSHVSYELR SPLTTIIGFA QLLDDTGIGP LNVKQRAYVN HITESSAALL 661 AIINDILDLA TIDAGSMALE LTEVDVRAAM DAAAEGVRDR LAEGGIRLSI ELQNAAGSFR 721 ADAKRVRQIL YNLLSNAVGF APEGSTVTLS AERREDGVIF RVRDMGPGVP PEIGARAFDR 781 FESHTAGSRH RGVGLGLSIV RSLVALHGGT VSLAPAQGGG TLVTCIFPLE AGASRDAAE //