LOCUS ADH87447.1 1167 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 outer membrane autotransporter barrel domain protein protein. ACCESSION CP002026-110 PROTEIN_ID ADH87447.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_0110" /inference="protein motif:TFAM:TIGR01414" /note="KEGG: rlg:Rleg_0480 outer membrane autotransporter barrel domain protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein" /transl_table=11 /db_xref="InterPro:IPR005546" /db_xref="InterPro:IPR006315" /db_xref="InterPro:IPR011050" BEGIN 1 MTRVKLGISS GRAAEAGNGR SGRTRHAALL ATTAVIALAY ASPVSAQTLW TGTNSNNWFD 61 PGNWSAGLPN NVTDAEVDNI AVNAPAVFAI GANARDLTIG NSAVGSLTVQ GAGVLLTTNG 121 YIGRGLGSTG TVVVTGTDSV WANTGDFYVG DQGSGSLTIA NGGQVISNDS FVGNVGSGLV 181 TVTGTDSTWT VTDPLIVGNF GSGMVNVDTG GTVETERVTV GAANGSEGFL DISGGTTSWI 241 ASSEFIVGEE GSGTVTVSDG ATVESQTLAV GFGPTGFGQV TITGVGTTWT TTASTGIGSD 301 GVGHLLIEAG AAFNTVGVSL GTGSGTVTGA GSSLTASGQI FVGAGGESTF TVSDGASVTS 361 VGANIALGGT GTATVTSGAN WTSSSTFIVG HSGLGTLNVT DGGTVNTLDS VLGRFAAGVG 421 ILNVEGEGAS FVNTGNMGIG NEGTGALSVT AGGTAEAQSV LLGMEANSGG SASISGAGSS 481 LTSNEFLFVG LEGNGVMFVE DGAQVNSVVA GIGASTGGIG EATVSGATWL NSSDLFIGAD 541 GTGVLTIADG GRVEVGGAVE IAAGAGSSGT LNIGAGEGLA AAAPGTLAAG EIVFGPGTGA 601 IVFNHTSTNY QFSAGMTGTG TIDLFSGTTV LTGNSSGFTG ATTLHGGTLA VNGTLGGTLD 661 VLAGRLQGTG TVGSTTIAGG AVIAPGNSIG TLNIAGNATF AAGSAYELEL DPNSSNGDLI 721 HATGTVAIEG GTVEHIGLAG AYSPLRTYTI VTADGGVDGE FAAVTSDFAF LDPTLSYDPN 781 NVYLTLIRND VDFGAVGLTP NQIATGNGTE SLGLGNPLYD AVLGLSAAQA RGAFDLLSGE 841 IHASAKSVLI DDSRFVREAA IDRVRAALGG VGASVSPVMA YGEGGPQSAA PTTDRFAIWG 901 QGFGSWGQID GDGNAAQINS STGGFFLGAD APIFETWRLG VIAGYSRTNF DVDARASSGS 961 SDNYPLGIYT GTQWGNLGFR SGLAYTWHEI DTSRSVAFPG FSESLTSSYD ASTFQAFGEL 1021 GYRIDVQAVA FEPFANVAYV SFDSDGFTEQ WGAAALYAGG QTTDTTFTTL GLRVAAGLGL 1081 AGADVTLRGT LGWRHAFGDV TPLSTQAFAG GDPFTIAGVP IAENAAVVEA GLDWNLTPQA 1141 TLGVAYNGQL ASDAQQNGFT ARLTVEF //