LOCUS ADH87409.1 843 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 DEAD/H associated domain protein protein. ACCESSION CP002026-72 PROTEIN_ID ADH87409.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_0072" /inference="protein motif:PFAM:PF08494" /note="KEGG: azc:AZC_0109 helicase; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein" /transl_table=11 /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR013701" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="InterPro:IPR017170" BEGIN 1 MDAARDDHLP EPFRSWFAGR GWAPRAHQLE LLAKAREGRS TLLIAPTGAG KTLAGFLPSL 61 VELSERPRAR NSVRPPGIHT LYISPLKALA VDVARNLERP ADEMALPIRI ETRTGDTPAS 121 RRQRQRRDPP DILLTTPEQI ALLLASADAE HLFGDLRRIV LDELHALAGS KRGDLLSLGL 181 ARLRCLAPQA QTVGLSATVA DPETLRRWLV PQAGDGAMGD VVIAEAGAAP DLSMLDSVAQ 241 VPWAGHTARH SLKEIYALIE ANTTTLVFVN TRMQAELLFQ ELWRINDANL PIALHHGSLD 301 VSQRRRVEAA MGEGRLKAVV CTSSLDLGID WGAVDLVINV GAPKGSSRLM QRIGRANHRL 361 DEPSRAVLVP ANRFEVLECR AALEAVRAGA QDSAVERSGA LDVLAQHVLG MACAGPFASD 421 ELYAEVTSAE PYAGLLRTDF DDVVAFVATG GYALRAYERF ARIRKMKDGR WRVTNPMVAQ 481 QYRLNVGTIV EATMLKVRLA SAKSRYGGRV LGEVEEYFAE QLSPGDTFVF AGEVLEFLSI 541 VEDEVRATRT SASEPKVPSY EGGKFPLSTF LASRVRALLA EPDRWSSLPG QVHEWLDLQK 601 LRSRLPGRAD LLVETFPRGG RHYLVAYPFE GRLAHQTLGM LLTRRLDRAR LRPLGFMAND 661 YALAIYGISD MSRAIQQGRL DLDELFDADM LGDDLEDWLA ESSLMKRTFR KCAVIAGLIE 721 RRFPGKEKNS RQVTMSTDLV YDVLRRHEPG HVLLRAARQD AATGLLDIRR LSDMLTRIRG 781 RIDHVALPRV SPLAVPVMLE IGREMVAGEA HEALLAEAED ELVREAMDGA DVSWDGAGGD 841 RRG //