LOCUS       ADG90230.1               442 aa    PRT              BCT 11-DEC-2013
DEFINITION  Thermobispora bispora DSM 43833 helix-turn-helix domain
            protein protein.
ACCESSION   CP001874-3493
PROTEIN_ID  ADG90230.1
SOURCE      Thermobispora bispora DSM 43833
  ORGANISM  Thermobispora bispora DSM 43833
            Bacteria; Actinobacteria; Streptosporangiales;
            Streptosporangiaceae; Thermobispora.
REFERENCE   1  (bases 1 to 4189976)
  AUTHORS   Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A.,
            Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F.,
            Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N.,
            Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A.,
            Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,
            Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J.,
            Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
            Kyrpides,N.C.
  TITLE     Complete genome sequence of Thermobispora bispora type strain (R51)
  JOURNAL   Stand Genomic Sci 2 (3), 318-326 (2010)
   PUBMED   21304716
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4189976)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
            Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
            Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
            Schneider,S., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of Thermobispora bispora DSM 43833
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4189976)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
            Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
            Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
            Schneider,S., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4082801
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Thermobispora bispora R51, DSM 43833
            Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO
                                     14880, NBRC 14880
            GOLD Stamp ID         :: Gi02237
            Funding Program       :: DOE-GEBA 2007
            Gene Calling Method   :: Prodigal
            Isolation Site        :: Decaying manure
            Oxygen Requirement    :: Aerobe
            Cell Shape            :: Filament-shaped
            Sporulation           :: Sporulating
            Temperature Range     :: Thermophile
            Temperature Optimum   :: 55 - 65C
            Gram Staining         :: gram+
            Biotic Relationship   :: Free living
            Diseases              :: None
            ##Metadata-END##
FEATURES             Qualifiers
     source          /organism="Thermobispora bispora DSM 43833"
                     /mol_type="genomic DNA"
                     /strain="DSM 43833"
                     /isolation_source="decaying manure"
                     /type_material="type strain of Thermobispora bispora"
                     /db_xref="taxon:469371"
                     /note="type strain of Thermobispora bispora"
     protein         /locus_tag="Tbis_3542"
                     /inference="protein motif:PFAM:PF01381"
                     /note="PFAM: helix-turn-helix domain protein; SMART:
                     helix-turn-helix domain protein; KEGG: bcz:BCZK1558
                     transcriptional regulator"
                     /transl_table=11
                     /db_xref="InterPro:IPR001387"
                     /db_xref="InterPro:IPR013026"
BEGIN
        1 MPSQGTIGDR VRGLRLSRRM SQAQLAGPDL SDSYVSLIES GKRTPTPAVA RLLAERLGCT
       61 TEFLLHGIEP RQRIDTELSL RHAELELHHG SPAVAADRFK AIMQASDGDN ATLATRAHVG
      121 FARALEAQGK IEQAVEEYER LRREAMEHPE RLSDLPLIVA LCRCYQRAGD RLRARDLGAE
      181 AQAKAERIGI VSGEVAIDLA LALVETGTGL PYVERVLDLT GVPEVRDRTA EVQALWRAST
      241 TAAEGDDSAL AVQLAEDALA VGRPARTALT SARIARELAQ IRVMDPNFDD LERAKELAEA
      301 ALRVFTGLSA DPRELGRSLA VLGWLRIRTG DTASAIELAQ RMLELSPATG GIIAATAHLV
      361 LAKAALARSD DATLALRRAH ELLDGDPEAH EREAAKTWRM LGDLYGQAGD RRSQATAYRK
      421 ALEAVGIHVT IPGVAGAAML AG
//