LOCUS ADG89589.1 1219 aa PRT BCT 11-DEC-2013 DEFINITION Thermobispora bispora DSM 43833 2-oxoglutarate dehydrogenase, E1 subunit protein. ACCESSION CP001874-2852 PROTEIN_ID ADG89589.1 SOURCE Thermobispora bispora DSM 43833 ORGANISM Thermobispora bispora DSM 43833 Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Thermobispora. REFERENCE 1 (bases 1 to 4189976) AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A., Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and Kyrpides,N.C. TITLE Complete genome sequence of Thermobispora bispora type strain (R51) JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010) PUBMED 21304716 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Thermobispora bispora DSM 43833 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082801 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Thermobispora bispora R51, DSM 43833 Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO 14880, NBRC 14880 GOLD Stamp ID :: Gi02237 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal Isolation Site :: Decaying manure Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Thermophile Temperature Optimum :: 55 - 65C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## FEATURES Qualifiers source /organism="Thermobispora bispora DSM 43833" /mol_type="genomic DNA" /strain="DSM 43833" /isolation_source="decaying manure" /type_material="type strain of Thermobispora bispora" /db_xref="taxon:469371" /note="type strain of Thermobispora bispora" protein /locus_tag="Tbis_2890" /inference="protein motif:TFAM:TIGR00239" /note="TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; KEGG: sus:Acid_5307 alpha-ketoglutarate decarboxylase" /transl_table=11 /db_xref="InterPro:IPR001017" /db_xref="InterPro:IPR001078" /db_xref="InterPro:IPR005475" /db_xref="InterPro:IPR011603" BEGIN 1 MSSQSSHTDP LASFGQNEWL VDELYQKYLE DPESVDRAWW NFFADYGSGV HAPPKSPAES 61 TNGKIAAAPA PPSAPKAPVK PEEKKAPAAK QAAPIPSGAT EERLRGAAAR TAQNMEASLA 121 VPTATSVRAI PAKLLIDNRI VINNHLRRGR GGKVSFTHLI GYAVVKALKA MPEMNYSYAE 181 VDGKPVLVKP EHVNLGLAID VQREDGSRQL LVPSIKKAET MDFRQFWVAY EDVVRRARAG 241 KLTVEDFQGT TITLTNPGTI GTVHSVPRLM PGQGTIIGVG AMEYPAEYQG AAEETLARLG 301 ISKVMTLTST YDHRIIQGAQ SGEFLRLIHQ LLLGADGFYE EIFESLRIPY EPVRWVQDIQ 361 ADHDDDVAKS ARVMELIHAY RVRGHLMADT DPLEYRQRKH PDLDINSHGL TLWDLEREFP 421 TGGFGGRPRM KLRDILGVLR DSYCRTIGIE YMHIQNPEER AWIQERVERP HPKPSRDEQL 481 RILRRLNTAE AFETFLQTKY VGQKRFSLEG GESLIPLLDS VISEAAKSRL DEVVIGMAHR 541 GRLNVLANIV GKSYAQIFSE FEGNLDPRSA HGSGDVKYHL GATGDFVAPD GSKIKTSVVA 601 NPSHLEAVDP VLEGVVRAKQ DLLERGGGEE GFTVLPILIH GDAAFAGQGV VAETLHLSQL 661 RGYRTGGTVH IVVNNQVGFT TSPTSSRSSV YATDVARMIQ APIFHVNGDD PEAVVAVGRL 721 AFEYRQAFRK DVVIDLVCYR RRGHNETDNP AFTQPLMYDL IEAKRSVRKL YTERLIGRGD 781 ITMEEAEQAL RDYQEQLERA FTETREAARN PVEFDASRIT QGEDRVPWSH EDTPTATTED 841 VIKRVIDTQI NLPEGFTVHP RLAPVLQRRA TMVAEDAIDW ATGELIAFGS LLIDGHPVRL 901 VGQDSRRGTF GQRHAVLIDR KTGAEHTPLK AFDHGTTKFY VYDSLLSEFA AMGFEYGYSV 961 ARPDALVIWE AQFGDFANGA QTIIDEFISS GEEKWGQRSS VVLLLPHGYE GQGPDHSSGR 1021 IERYLQLCAR DNMTVTVPST PANYFHLLRW QVLSNRRKPL IVFTPKSLLR LKAATSAKHE 1081 FTSGSFKPVI GDAKVDPAKV RTVVLCTGKF YYDMLARREK LGRDDIALVR IERLYPFPER 1141 PLKAELARYR DDVELVWAQE EPMNMGVWPY LALKMVEKPD LFGGRTLRRV SRLPNSSPAT 1201 GSQHKHESEQ EELLQQIFG //