LOCUS ADG89275.1 835 aa PRT BCT 11-DEC-2013 DEFINITION Thermobispora bispora DSM 43833 pyruvate phosphate dikinase PEP/pyruvate- binding protein protein. ACCESSION CP001874-2538 PROTEIN_ID ADG89275.1 SOURCE Thermobispora bispora DSM 43833 ORGANISM Thermobispora bispora DSM 43833 Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Thermobispora. REFERENCE 1 (bases 1 to 4189976) AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A., Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and Kyrpides,N.C. TITLE Complete genome sequence of Thermobispora bispora type strain (R51) JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010) PUBMED 21304716 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Thermobispora bispora DSM 43833 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082801 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Thermobispora bispora R51, DSM 43833 Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO 14880, NBRC 14880 GOLD Stamp ID :: Gi02237 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal Isolation Site :: Decaying manure Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Thermophile Temperature Optimum :: 55 - 65C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## FEATURES Qualifiers source /organism="Thermobispora bispora DSM 43833" /mol_type="genomic DNA" /strain="DSM 43833" /isolation_source="decaying manure" /type_material="type strain of Thermobispora bispora" /db_xref="taxon:469371" /note="type strain of Thermobispora bispora" protein /locus_tag="Tbis_2573" /inference="protein motif:PFAM:PF01326" /note="PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: scl:sce7847 pyruvate, water dikinase" /transl_table=11 /db_xref="InterPro:IPR002192" /db_xref="InterPro:IPR008279" BEGIN 1 MTPFVVPLTA VGRDDLALAG GKGANLGELI AAGLPVPDGF VVTTAAYAEL IDRCGIAERI 61 PRLLDAGDGA GIRAEFATAE IPAAMAEAIT AAYRELGQGP VAVRSSATAE DLPGAAFAGQ 121 QDTYLNVEGD DARLDAVRRC WGSLWTDRAI AYRRRLGIGP EQVRIAVVVQ RMVNPDAAGV 181 MFTADPVSGD RDRIVVDASP GLGEAVVSGR VTPDHYELDR RGTVLAWTPG RAEVVVRAAA 241 GGGLAEEAGQ ATGERLLGDA ALAGLARLGV AVQDRFGRPM DIEWALAGGR VWLVQARPMT 301 ALPPPPVRLN AIQRRLGEML LDYLPTRPYP MDMSTWIPYG PAGMMAEVAR SLGVRGLFEG 361 ALEEQDGVVY RILPRPPRLT PKALAAPFLL LHRAGRFDPA RWTEDPRFTG FLREVERLRG 421 LDPAAMPWPE LIRLPRRALD AVRPITELRR DYLPRGALMV LRLVAALLPL GAAAMWADLL 481 AGARTRTEDG NRALERLAAQ VREDPRLKAA VDALDLDRVK GFTGFWAEFT AFLAEYGHRE 541 TGSPVLASSP TWEETPEVVL GMLKVLAASP PSPSAGRSGE AERRLRAHPW LRSPRRWARM 601 ARRIAAARTA WAFREDTHFY FTMPLPVLRR ALLEIGARLR DAGVLETAED VFHLRLEEVE 661 AAGDPATMPR SRREELAATA RARAARRQEL AGVRLIDPRA VYPDRGDLGD ALVRGTPGGG 721 GTVTGPVRII RDPSEFGRLA EGEVLVCPNT NPSWTPLFQR AAAVVVDAGG IGSHAAIVAR 781 EYGLPAVLGT ATGTAVLTDG QMVTVDGDAG VGQERLMIAV PRSGEARETV RGGER //