LOCUS       ADG89218.1               650 aa    PRT              BCT 11-DEC-2013
DEFINITION  Thermobispora bispora DSM 43833 transcriptional regulator,
            CdaR protein.
ACCESSION   CP001874-2481
PROTEIN_ID  ADG89218.1
SOURCE      Thermobispora bispora DSM 43833
  ORGANISM  Thermobispora bispora DSM 43833
            Bacteria; Actinobacteria; Streptosporangiales;
            Streptosporangiaceae; Thermobispora.
REFERENCE   1  (bases 1 to 4189976)
  AUTHORS   Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A.,
            Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F.,
            Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N.,
            Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A.,
            Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,
            Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J.,
            Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
            Kyrpides,N.C.
  TITLE     Complete genome sequence of Thermobispora bispora type strain (R51)
  JOURNAL   Stand Genomic Sci 2 (3), 318-326 (2010)
   PUBMED   21304716
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4189976)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
            Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
            Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
            Schneider,S., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of Thermobispora bispora DSM 43833
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4189976)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
            Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
            Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
            Schneider,S., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4082801
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Thermobispora bispora R51, DSM 43833
            Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO
                                     14880, NBRC 14880
            GOLD Stamp ID         :: Gi02237
            Funding Program       :: DOE-GEBA 2007
            Gene Calling Method   :: Prodigal
            Isolation Site        :: Decaying manure
            Oxygen Requirement    :: Aerobe
            Cell Shape            :: Filament-shaped
            Sporulation           :: Sporulating
            Temperature Range     :: Thermophile
            Temperature Optimum   :: 55 - 65C
            Gram Staining         :: gram+
            Biotic Relationship   :: Free living
            Diseases              :: None
            ##Metadata-END##
FEATURES             Qualifiers
     source          /organism="Thermobispora bispora DSM 43833"
                     /mol_type="genomic DNA"
                     /strain="DSM 43833"
                     /isolation_source="decaying manure"
                     /type_material="type strain of Thermobispora bispora"
                     /db_xref="taxon:469371"
                     /note="type strain of Thermobispora bispora"
     protein         /locus_tag="Tbis_2516"
                     /inference="protein motif:PFAM:PF01590"
                     /note="PFAM: GAF domain protein; SMART: GAF domain
                     protein; KEGG: mpt:Mpe_B0536 CdaR family transcriptional
                     regulator"
                     /transl_table=11
                     /db_xref="InterPro:IPR003018"
BEGIN
        1 MHVPAPIVAV PWQGETEPCG EGQRDAAWRP RPAHWNEVLE VFKEVAVHAT TSADLNEILT
       61 VIGSRLCHLL GVKRCSVYLR RDDGKFQGAA GWSATEGDIG DKIRILVSGI EGDRFTQDIV
      121 ESRSAVLVVN AQQDPRTIHK TMVRWRVRDM LGVPLVVAGE VIGIIYVDNE QDPHVYDPVQ
      181 IEVAELFGSL AALVVQQAVL HNRLRAQAIQ LTRQKRTLEH LTNVHEQLVR AVLEGADLNR
      241 AVQMLSGLLN RPVVLYNPRF DVMAWAAPPG MAMQSAPVIP ERVLKMPSVA AVINELNADR
      301 PSAIIPPTLA VGLGSRHLLC VLMTEGRPAG YLGVVEIGRA ITDLDTKIAE QGAVVMALQV
      361 LSERRQIEAE GQAREDFLSD LLRGTRDEEQ LMRRAPQFGI DLRSPYVLVR FCYADGQPAT
      421 PRTARRAVLA RALGRGLGMP EPPVIGVPGS DIALVRLTGG SEPAALRRVR RRLEALLREL
      481 SAKFKIEKVL VSSVCRRVGD FPLAHREIRE LEELTTAFNW SRGLLFADDL GLFRLIVNSN
      541 RLKEAVRFAT DFVRPLARYD ESTGGQLVET LRAYVQAEGQ VRGAAELLGV HENTIRYRLA
      601 KMREMGSLDP HRMDMLLTAR LAFQILDFAS GGPLGQASGP AVPAAGSQVV
//