LOCUS ADG89059.1 912 aa PRT BCT 11-DEC-2013
DEFINITION Thermobispora bispora DSM 43833 Nitrite reductase (NO-
forming) protein.
ACCESSION CP001874-2322
PROTEIN_ID ADG89059.1
SOURCE Thermobispora bispora DSM 43833
ORGANISM Thermobispora bispora DSM 43833
Bacteria; Actinobacteria; Streptosporangiales;
Streptosporangiaceae; Thermobispora.
REFERENCE 1 (bases 1 to 4189976)
AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A.,
Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F.,
Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N.,
Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A.,
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,
Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J.,
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
Kyrpides,N.C.
TITLE Complete genome sequence of Thermobispora bispora type strain (R51)
JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010)
PUBMED 21304716
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Thermobispora bispora DSM 43833
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082801
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Thermobispora bispora R51, DSM 43833
Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO
14880, NBRC 14880
GOLD Stamp ID :: Gi02237
Funding Program :: DOE-GEBA 2007
Gene Calling Method :: Prodigal
Isolation Site :: Decaying manure
Oxygen Requirement :: Aerobe
Cell Shape :: Filament-shaped
Sporulation :: Sporulating
Temperature Range :: Thermophile
Temperature Optimum :: 55 - 65C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
##Metadata-END##
FEATURES Qualifiers
source /organism="Thermobispora bispora DSM 43833"
/mol_type="genomic DNA"
/strain="DSM 43833"
/isolation_source="decaying manure"
/type_material="type strain of Thermobispora bispora"
/db_xref="taxon:469371"
/note="type strain of Thermobispora bispora"
protein /locus_tag="Tbis_2351"
/EC_number="1.7.2.1"
/inference="protein motif:PRIAM:1.7.2.1"
/note="PFAM: multicopper oxidase type 3; multicopper
oxidase type 2; KEGG: bpd:BURPS668_A2061 multicopper
oxidase domain- containing protein"
/transl_table=11
/db_xref="InterPro:IPR001287"
/db_xref="InterPro:IPR011706"
/db_xref="InterPro:IPR011707"
BEGIN
1 MTREPRRRRG FSPLRDLPVM GWLTALIVVV IAHPFLPAPK WLMLHLLLLG ALSHSILVWS
61 RHFADALLRT PERDPTAQRI RLGLHNGGAL LVIAGVATDL LPLTAVGAAS VAAAALWHGA
121 ALVARLRTAL PSRFSITVRF YVAASCFLPI GALLGTLLAR GFTEVWHERL KLAHAIVNLL
181 GWAGLTVVGT LLTLWPAMLR TRMAEGAERA TRRALPLLTA GIVTAAGGAI AGARPLVALG
241 LAGYLAGLGV TAVPMARAAK GKPPASYATW SVLAAVAWLA GSLAVLVAVV AVTPTWPAIG
301 DRFSGITPAL AAGFGAQVLL GTLSYLVPVA LGRGAGPVRV AADTLDRAAA FRVVIVNAGL
361 LVSVLPVPVL VRVLCSFLVF GGLGAFLPLL IIAIRRSRAA RRAAGAPAPG DGAAAAQGAA
421 GSPGDRLRRP AAGLAVAGLA VVVLAVASGV ALDPGAVSKA RAAAEASAEV RATGRTVTAR
481 VEARDMRFSP ATIEVSPGDR LVITLVNTDD EDVHDLVLDT GQETGRLAPG ESARIDVGVV
541 GRDIEGWCSV LGHRQMGMVL HIRATGAGSA PAGGHQHGHG TAGPSGASGD HTAGASGHGS
601 SGASGGGAPG GSGDGAPRED AAARLDFTAR PGPGFTPYDP VLRPASEQRL HRYTFRVHEV
661 EREVAPGVTQ RLWTFNGQMP GPVLHGKVGD TFEITLVNDG TIGHSIDFHA GSLAPDKPMR
721 TIPPGESLVY RFTAIKAGVW MYHCSTMPMS AHIANGLFGA VIIEPEDLPA ADRSYVLVQS
781 ELYLGPPGGE ADMDKIRAER PDAVVFNGYV NQYDHRPLAA RAGERVRVWL LAAGPNRGTS
841 FHVVGGQFDT VYAEGAYLLR PPGDGGSQSL ALAPAQGGFV ELVFPEPGHY PFVSHAMVDA
901 ERGAHGIFKV TE
//