LOCUS ADG88496.1 1065 aa PRT BCT 11-DEC-2013
DEFINITION Thermobispora bispora DSM 43833 acriflavin resistance
protein protein.
ACCESSION CP001874-1759
PROTEIN_ID ADG88496.1
SOURCE Thermobispora bispora DSM 43833
ORGANISM Thermobispora bispora DSM 43833
Bacteria; Actinobacteria; Streptosporangiales;
Streptosporangiaceae; Thermobispora.
REFERENCE 1 (bases 1 to 4189976)
AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A.,
Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F.,
Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N.,
Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A.,
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,
Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J.,
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
Kyrpides,N.C.
TITLE Complete genome sequence of Thermobispora bispora type strain (R51)
JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010)
PUBMED 21304716
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Thermobispora bispora DSM 43833
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082801
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Thermobispora bispora R51, DSM 43833
Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO
14880, NBRC 14880
GOLD Stamp ID :: Gi02237
Funding Program :: DOE-GEBA 2007
Gene Calling Method :: Prodigal
Isolation Site :: Decaying manure
Oxygen Requirement :: Aerobe
Cell Shape :: Filament-shaped
Sporulation :: Sporulating
Temperature Range :: Thermophile
Temperature Optimum :: 55 - 65C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
##Metadata-END##
FEATURES Qualifiers
source /organism="Thermobispora bispora DSM 43833"
/mol_type="genomic DNA"
/strain="DSM 43833"
/isolation_source="decaying manure"
/type_material="type strain of Thermobispora bispora"
/db_xref="taxon:469371"
/note="type strain of Thermobispora bispora"
protein /locus_tag="Tbis_1784"
/inference="protein motif:PFAM:PF00873"
/note="PFAM: acriflavin resistance protein; KEGG:
bsu:BSU06710 hypothetical protein"
/transl_table=11
/db_xref="InterPro:IPR001036"
BEGIN
1 MNPLARLSLA NRSLVLLISL ALGVLGAFAI PSLKQQLFPS LELPAAFAVA GYPGAAPEIV
61 EEQVTEPLES AFKGISGVTE ITSTSKEGLA QIQVAFDYGT DIDDAVASMQ QAVNRIKAQL
121 PSGVDPQIIA GSTDDIPVLV IAVAEAGDQQ AMLGKIERIM VPKLRAIEGV RDVSVTGARE
181 RQVVITPNLM KMAMLGLSPT AIPELLRANG VTIPAGSFTK DGKALTVQTG ERIRTVDDLK
241 NLYLMPGAQS AGSTGATAGG DAARAAAAKA RAVKPVKLGD VATIEVKEAP ATSFTRTNGQ
301 PTLGVAITMR PDGNAVQISH EVRELLPGLT RDLGDAAELT IVFDQAPYVE HSIKDLTTEG
361 LLGLVFAVVV ILVFLLSVRS TLVTAVSIPL SVVIALIALW ARDYSLNILT LGGLTIAIGR
421 VVDDSIVVLE NIKRHLSYGE EKRQAILTAV REVAGAVTSS TLTTVAVFLP IAFVGGIVGQ
481 LFSQFAITVT VALLASLLVS LTVIPVLAYW FLKTPRFSPQ EAEAVREDAE RRELQNPLQR
541 AYIPVLRFAT RRRLTTVVIG LVVFAGTMAL TPALKTNFLD STGNNTTQIT QRMPAGTDLA
601 VTDEAAKKVE DVLRSVPGIE AYQVTVGGGD MLAGLGGGSD QATYSITLAE GADTPAIEQE
661 LRDRLAKVPD IGEVTVGLSH GGFNSDRIEV ILKGADADAL RTAATTVRDA MAEVEGMRDV
721 TSNLEESAPR VEVQVDRAKA AARGLSEAAI GQLVAQAFRG TPIGSIDGDG RPTDIVLRMG
781 DAPASVTEVR NLALPTASGM VKLSDVADVA VVDGPTRVTR QDGERTATVS GIADAGNLGE
841 VTAKVTDKLE SLKLPEGVTW EIGGASADME KAFADLLLAM ALAVIIVYSI MVATFRSLIQ
901 PLILLVSIPF AGTGAIGLLL ATDTALGVPA LIGMLMLIGI VVTNAIVLID LINQYRAQGM
961 GIVDAVIEGG RRRLRPILMT AVATICALTP MALGVTGSGG FISRPLAIVV IGGLVSSTLL
1021 TLVLVPTLYT MVERTKERMR RTPKPEKADD DSVKVYDKEA LTPAK
//