LOCUS ADG88259.1 1387 aa PRT BCT 11-DEC-2013
DEFINITION Thermobispora bispora DSM 43833 serine/threonine protein
kinase protein.
ACCESSION CP001874-1522
PROTEIN_ID ADG88259.1
SOURCE Thermobispora bispora DSM 43833
ORGANISM Thermobispora bispora DSM 43833
Bacteria; Actinobacteria; Streptosporangiales;
Streptosporangiaceae; Thermobispora.
REFERENCE 1 (bases 1 to 4189976)
AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A.,
Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F.,
Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N.,
Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A.,
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,
Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J.,
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
Kyrpides,N.C.
TITLE Complete genome sequence of Thermobispora bispora type strain (R51)
JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010)
PUBMED 21304716
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Thermobispora bispora DSM 43833
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082801
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Thermobispora bispora R51, DSM 43833
Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO
14880, NBRC 14880
GOLD Stamp ID :: Gi02237
Funding Program :: DOE-GEBA 2007
Gene Calling Method :: Prodigal
Isolation Site :: Decaying manure
Oxygen Requirement :: Aerobe
Cell Shape :: Filament-shaped
Sporulation :: Sporulating
Temperature Range :: Thermophile
Temperature Optimum :: 55 - 65C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
##Metadata-END##
FEATURES Qualifiers
source /organism="Thermobispora bispora DSM 43833"
/mol_type="genomic DNA"
/strain="DSM 43833"
/isolation_source="decaying manure"
/type_material="type strain of Thermobispora bispora"
/db_xref="taxon:469371"
/note="type strain of Thermobispora bispora"
protein /locus_tag="Tbis_1544"
/inference="protein motif:PFAM:PF08378"
/note="PFAM: NERD domain protein; SMART: serine/threonine
protein kinase; KEGG: pna:Pnap_4285 protein kinase"
/transl_table=11
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR011528"
/db_xref="InterPro:IPR017441"
BEGIN
1 MEPGSKRWIE VTPSQHAHER GGLAAIRALL PDAEPYRAWS NFTFTTKGNR QYEVDLLVIG
61 KAGIFLLELK HWSGTITGDH QTWFHNGFAE DNPRILAESK AKHFKQLLIE TGERAVPFVY
121 AGVVLHNPEA QVRLTERGRA GVYRIDGQGP AGLPELIKDL ITAEPRNPHH LIDAKRSQDL
181 AKLIKKAGVR QSMQFRKVGN LLLAEDPIAE GPGWQDYLAK HPMLDRPRRV RFYLVNKAAS
241 PNERAAIMRA AQREFIVLEN LNHPGIARAI EFYEHERGPA VVFDHDPTET RLDHFMRQKG
301 AALTVEQRVD LVRTLAQTLR YAHSRRLVHR RLSPLSVFVR NLAQGKYGVR VRDWHTAGRL
361 MPGTPGHRAQ VAGTRTLDAL TDKGAHGYIA PETLHSPDAD PILADIFGLG AVSYLIFTGA
421 APAESSEQLH QRLARERGLD VRVALDGAPQ AMVDLVHDAT AADADLRIAS VDEFVERLER
481 LAQEVTAEQA AAEQVDPLEA VAGSRIGPAD DPTRFEVIQR LGQGSTALAL LVKDPVHGQA
541 VLKVAIDEED ARQRLLDEAE VLPLARDPRV VRCLEGPMTV GGRTALLLED AGRETLAALI
601 RREGRLSLDF LARWGTDLLD ILAALDLAGI NHRDIKPDNL AFRELGKNRE VHLTLFDFSL
661 SRAPLEQTAV GTPPYLDPFF DPVHRPRYDA AAERYAAAVT LYEMATGQTP IYGSGTSHPA
721 VIDSDVTIDP EDFEPGPARD PLIAFLRKAL ARDVKQRHDS IESMRLEWRA VFEAVPPAAA
781 TPASVNPVTG KELDEAAARA TLDTPIAAAG LTPRAVDALH RIDVRTVRDL LARSPFELSR
841 LSGVADPTKR EIRRRAKQWR ARLQPATPEP IGTGEPADDL GRGVDAVLRS LLPKGVKPDT
901 AEAQVLRCYL GLEETESAWP TNAELGEAAG VTAGRVSQIL PKARKRWRQS KALAEVRDEI
961 VHLVTEAGGV LSAEAIAETL LTLRGSAAAG DQRMRRALGL VRTAVEVEAE RGGEARLLHR
1021 RTRNSAIVAL EEPTDPDAVA GTDLLDYAVR LGRVADRLAA EDPLPTAEQT EAQLRKVRLP
1081 QGMAELPAER LAALAAAASE RAAANGRGEI YPDGLDPRRA LERLSSSFGV IRYGLTPDQL
1141 KARIRVRYPR VGPLPDDLQD LDALLRLARV PLVFQDGVFW PRRDVQSSVL VPSTHGSFTR
1201 LAGPVADRDS ADFERRLTAS LEERGFVTIS ASFRAYPEAI RALAGRFGVE VVDVTAELLV
1261 AMRTTAEANN VDWSLVLRAD RPDAAPQDAA NLRLLVGLAA TGLEERLRTD PRPLLIIEAA
1321 PLARYDRLAV LEQLADKATD RPAARWLLVP VEQDGRPYLD NRPAPGALGA VRLPSAWLVQ
1381 QRRQAAS
//