LOCUS ADG87790.1 773 aa PRT BCT 11-DEC-2013 DEFINITION Thermobispora bispora DSM 43833 guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase protein. ACCESSION CP001874-1053 PROTEIN_ID ADG87790.1 SOURCE Thermobispora bispora DSM 43833 ORGANISM Thermobispora bispora DSM 43833 Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Thermobispora. REFERENCE 1 (bases 1 to 4189976) AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A., Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and Kyrpides,N.C. TITLE Complete genome sequence of Thermobispora bispora type strain (R51) JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010) PUBMED 21304716 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Thermobispora bispora DSM 43833 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082801 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Thermobispora bispora R51, DSM 43833 Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO 14880, NBRC 14880 GOLD Stamp ID :: Gi02237 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal Isolation Site :: Decaying manure Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Thermophile Temperature Optimum :: 55 - 65C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## FEATURES Qualifiers source /organism="Thermobispora bispora DSM 43833" /mol_type="genomic DNA" /strain="DSM 43833" /isolation_source="decaying manure" /type_material="type strain of Thermobispora bispora" /db_xref="taxon:469371" /note="type strain of Thermobispora bispora" protein /locus_tag="Tbis_1068" /EC_number="2.7.7.8" /inference="protein motif:TFAM:TIGR02696" /note="KEGG: pzu:PHZ_c3432 polyribonucleotide nucleotidyltransferase; TIGRFAM: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein" /transl_table=11 /db_xref="InterPro:IPR001247" /db_xref="InterPro:IPR003029" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR014069" /db_xref="InterPro:IPR015847" /db_xref="InterPro:IPR015848" BEGIN 1 MEGVHTSEAV IDNGSFGTRT VRFETGRLAR QATGSAVAYL DDETMVLSAT TVSKQPKEGL 61 DFFPLTVDVE ERMYAAGKIP GSFFRREGRP SEDAILTCRL IDRPLRPSFA KGLRNEVQIV 121 ATVLAIHPDH LYDVVAINAA SMSTQLAGLP FSGPIGGVRV GLIDGKWVAF PTYSELENAT 181 FDMVVAGRVL EDGDVAIMMV EAESTRNTLK LVAEGAVAPT EEVVAQGLEA AKPFIKVLCE 241 AQEKLAKVAG KAPGNYPIYP DYQDDVYEAV CAAVKSELAA ALTIPGKQER ELEIERVKAI 301 AAEKLLPEFE GREKEIGPAF RALTRQLMRE RVLNEGIRID GRGPKDIRQL NAEVHVIPRV 361 HGSALFERGE TQILGITTLN MLRMEQTIDT LNPERTKRYM HNYNFPPYST GEVGRVGAPK 421 RREIGHGALA ERALLPVLPS REEFPYAIRQ VSEAIGSNGS TSMGSVCAST MSLLDAGVPL 481 KDMVAGIAMG LIGENGKYVT LTDIIGAEDA MGDMDFKVAG TRDLITALQL DTKLDGIPAE 541 VLAGALKQAR SARLAILDVM KEAIDAPAPL NPNAPRILTL KVPVDKIGDV IGPKGKIINQ 601 IQEKTGAEIT IEDDGTIYIG ATDGASAEAA SALINGIANP HMPEVGERYL GTIVKLAAFG 661 AFVSLLPGKD GLLHISQIRK LYGGKRIDNV EDVLTVGEKI QVEVVEIDSR GKLSLVPVEV 721 IERERAEKEK AEKEKAEKEK AAAAATASAD EDEQPRRPRR RRTRAGRTTQ RNT //