LOCUS ADG87783.1 961 aa PRT BCT 11-DEC-2013 DEFINITION Thermobispora bispora DSM 43833 translation initiation factor IF-2 protein. ACCESSION CP001874-1046 PROTEIN_ID ADG87783.1 SOURCE Thermobispora bispora DSM 43833 ORGANISM Thermobispora bispora DSM 43833 Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Thermobispora. REFERENCE 1 (bases 1 to 4189976) AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A., Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and Kyrpides,N.C. TITLE Complete genome sequence of Thermobispora bispora type strain (R51) JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010) PUBMED 21304716 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Thermobispora bispora DSM 43833 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4189976) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082801 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Thermobispora bispora R51, DSM 43833 Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO 14880, NBRC 14880 GOLD Stamp ID :: Gi02237 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal Isolation Site :: Decaying manure Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Thermophile Temperature Optimum :: 55 - 65C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## FEATURES Qualifiers source /organism="Thermobispora bispora DSM 43833" /mol_type="genomic DNA" /strain="DSM 43833" /isolation_source="decaying manure" /type_material="type strain of Thermobispora bispora" /db_xref="taxon:469371" /note="type strain of Thermobispora bispora" protein /locus_tag="Tbis_1061" /inference="protein motif:TFAM:TIGR00487" /note="TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Ras family protein; KEGG: gbm:Gbem_1302 translation initiation factor IF-2" /transl_table=11 /db_xref="InterPro:IPR000178" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006847" /db_xref="InterPro:IPR013753" BEGIN 1 MAKVRVYELA KEFGVESKVV MAKLNEMGEF VRSASSTVEA PVVRKLTEAF KNEAAAKSGA 61 KEQAKEAQPK PAQQAAGSAA AQAQAQAQAK PAGTAGAAAK PAPKPAPPPG ARPVPTPPPS 121 AAQPAARPGG AVPEAPRPQP PAAGPRPTPA SIPKPGPRPG PIPRPPVPAP PPGAAGAVPR 181 PPIPKPGPRG PRPGNNPFTS TTGMGQRPRP AGGPAAGAQP RQPGKDAPIP RPPSARGGPG 241 GPVPRPGAPR PSPMMMPQGR PAAPGARPGA GRPGGGGGRP AGGGRAGAGF GVSRAGGGAG 301 RPGGGGFGGR PGGGGRGRGG SGGAFGRPSG RPARGRKSKR QRRQEFDNLQ APTIGGVQVP 361 RGNGQTIRLP RGATLTDFAD RIGANPASLV QILLHLGEMV TATQSVSEET LQLLGAELDY 421 DVQIVSPEEE DRELLESFNI EFGEDQGDEA DLVPRPPVVT VMGHVDHGKT KLLDTIRNTN 481 VAAREAGGIT QHIGAYQVTT TLDGEERKIT FIDTPGHEAF TAMRARGAQV TDIAVLVVAA 541 DDGVKPQTIE ALNHARAADV PVVVAVNKID KEGADPIKVR SQLTEYDLVA EEYGGSTLFV 601 DISAKEGIGI DNLLEAILLT ADAELDLRAN PDMPAQGVAI EAHLDKGRGP VATVLVQRGT 661 LRVGDSIVCG EAFGRVRAML DDNGKALKEA PPSCPVQVLG LTSVPRAGDN FIVVPDDRVA 721 RQIAQQRAAR QRSAEMAKSG RRRTLEEMFK DLEKGKVSEL KLIIKGDVSG SVEALEDALL 781 KIDVGEEAKL RVLHRGVGAI TEYDVNLAMA DDNAVIIGFN VRPEVRAREL AEREGVDIRY 841 YSVIYQAIEE IEAALKGLLK PEYEEVVTGT AEIREIFRVP KIGNVAGCVV RSGVITRNSK 901 ARLIRDGTVV ADNLTIESLR RFKDDVTEVR EGFECGIGLG YNDIKIEDVI ETFEMREKPR 961 A //