LOCUS ADG87697.1 950 aa PRT BCT 11-DEC-2013
DEFINITION Thermobispora bispora DSM 43833 histidine kinase protein.
ACCESSION CP001874-960
PROTEIN_ID ADG87697.1
SOURCE Thermobispora bispora DSM 43833
ORGANISM Thermobispora bispora DSM 43833
Bacteria; Actinobacteria; Streptosporangiales;
Streptosporangiaceae; Thermobispora.
REFERENCE 1 (bases 1 to 4189976)
AUTHORS Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A.,
Glavina,T., Del,Rio., Nolan,M., Lucas,S., Tice,H., Cheng,J.F.,
Han,C., Woyke,T., Goodwin,L., Pitluck,S., Ivanova,N.,
Mavromatis,K., Mikhailova,N., Chertkov,O., Kuske,C., Chen,A.,
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,
Detter,J.C., Brettin,T., Rohde,M., Goker,M., Bristow,J.,
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
Kyrpides,N.C.
TITLE Complete genome sequence of Thermobispora bispora type strain (R51)
JOURNAL Stand Genomic Sci 2 (3), 318-326 (2010)
PUBMED 21304716
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Thermobispora bispora DSM 43833
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4189976)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Jando,M.,
Schneider,S., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082801
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Thermobispora bispora R51, DSM 43833
Culture Collection ID :: DSM 43833, ATCC 19993, CBS 139.67, IFO
14880, NBRC 14880
GOLD Stamp ID :: Gi02237
Funding Program :: DOE-GEBA 2007
Gene Calling Method :: Prodigal
Isolation Site :: Decaying manure
Oxygen Requirement :: Aerobe
Cell Shape :: Filament-shaped
Sporulation :: Sporulating
Temperature Range :: Thermophile
Temperature Optimum :: 55 - 65C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
##Metadata-END##
FEATURES Qualifiers
source /organism="Thermobispora bispora DSM 43833"
/mol_type="genomic DNA"
/strain="DSM 43833"
/isolation_source="decaying manure"
/type_material="type strain of Thermobispora bispora"
/db_xref="taxon:469371"
/note="type strain of Thermobispora bispora"
protein /locus_tag="Tbis_0974"
/inference="protein motif:PFAM:PF08376"
/note="PFAM: Nitrate and nitrite sensing domain protein;
ATP-binding region ATPase domain protein; histidine kinase
HAMP region domain protein; SMART: ATP-binding region
ATPase domain protein; histidine kinase HAMP region domain
protein; KEGG: mag:amb0854 methyl-accepting chemotaxis
protein"
/transl_table=11
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR010910"
/db_xref="InterPro:IPR013587"
BEGIN
1 MRTRLVALIL VPTVAALLLG GLRVFTSLTT ASEYQRVNDL ARLVQSVAVL THELQTERDR
61 AAWNAALGRP EKATAAVVTQ TTAVNKAAAE VRKIAASVRA DAEPRAADRI DHVISRLDTL
121 ESLRKQAVSG SLLPGAVMTQ YTLILDELLE LHDELSVIAG DERLAAMSTS LGALATAKEA
181 MSVQRGLLTT VLPAGRFDQE QYRQFLGALA IEERALSTFR KHASREERAE YDRTVSGAGV
241 EDAAFLRALV LDRVAAGFSL HQLDRTARDD ARRWFDAMTQ PINSIRTVEG KLAASIVDRS
301 AALQADEERR AMIASAAIAL LLIAVLFFTT GVIQSLVRPL RRLRSEALEI AGHRLPETVQ
361 RLREAGDAAE IPEIQPIGIG TRDEIGEVAR AFDEVHREAV RLAGDEARLR SNVNAMFVNL
421 SRRTQTLVER QLSLIENLEQ GEQDEDRLKD LFKLDHLATR MRRNSENLLV LAGQEPARRW
481 GRPVPIVDVV RASLSEVEGY ERVDFKVQPG VALVGQAVND VVHLLAELIE NALSFSPRDS
541 KVTVSSSRID GGGLLISVSD TGIGMTPEEI EQANHRLANP PVVDVSISRR MGLFVVGRLA
601 LRHGIRVQLR RQDSGGLTAM VLLPEALLVR SEPAFAHLPG LSQTGATGPM PVGADAPGSG
661 PTSLFEPPQR TPVLGAAVPE TGAADTGRFE RGTFEPFQPS DAVAADPFAR DLFGSPPAAS
721 DRSFDTETRP FETASFARGQ FGEPPIDTPW PGHVPPPGST SWPEPIGPET GGWPGDPRAG
781 SFGEDDTGRL PTVRTSPLEA DEEEYLPIFA AVESDWFKKA DPSAGKDSEG ESGDTKGWSS
841 PADAGWEAAK AASEPTLGGT TAAGLPKRVP KANLVPGSAA TSTPAEPAAS AAPSPMLSPE
901 RVRSRLSSFQ QGVRQGRAVA RGEASGEEQG SAWTAALGDT RAQDGDKEDS
//