LOCUS ADD69625.1 619 aa PRT BCT 10-SEP-2019 DEFINITION Denitrovibrio acetiphilus DSM 12809 glucose inhibited division protein A protein. ACCESSION CP001968-2818 PROTEIN_ID ADD69625.1 SOURCE Denitrovibrio acetiphilus DSM 12809 ORGANISM Denitrovibrio acetiphilus DSM 12809 Bacteria; Deferribacteres; Deferribacterales; Geovibrionaceae; Denitrovibrio. REFERENCE 1 (bases 1 to 3222077) AUTHORS Kiss,H., Lang,E., Lapidus,A., Copeland,A., Nolan,M., Glavina Del Rio,T., Chen,F., Lucas,S., Tice,H., Cheng,J.F., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Spring,S., Rohde,M., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460) JOURNAL Stand Genomic Sci 2 (3), 270-279 (2010) PUBMED 21304711 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3222077) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S., Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Denitrovibrio acetiphilus DSM 12809 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3222077) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S., Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAR-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4083324 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Denitrovibrio acetiphilus N2460, DSM 12809 Culture Collection ID :: DSM 12809 GOLD Stamp ID :: Gi02322 Greengenes ID :: 43329 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 7.84x Sanger, 27.5x pyrosequence Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Oil reservoir model column Isolation Country :: Norway Oxygen Requirement :: Anaerobe Cell Shape :: Vibrio-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water, Marine ##Metadata-END## FEATURES Qualifiers source /organism="Denitrovibrio acetiphilus DSM 12809" /mol_type="genomic DNA" /strain="DSM 12809" /culture_collection="DSM:12809" /type_material="type strain of Denitrovibrio acetiphilus" /db_xref="taxon:522772" /note="type strain of Denitrovibrio acetiphilus" protein /locus_tag="Dacet_2875" /inference="protein motif:TFAM:TIGR00136" /note="KEGG: gur:Gura_4427 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A" /transl_table=11 /db_xref="InterPro:IPR002218" /db_xref="InterPro:IPR004416" /db_xref="InterPro:IPR013027" BEGIN 1 MLTYGKTYDV IVVGAGHAGC EAALASARMG ADTLLFTISV ESLAQMSCNP AIGGLAKGNI 61 VKDIDALGGE MAKNTDETGI QFRVLNMKKG PAVRSSRAQA DKELYRQRML QVIMQQSSLD 121 LKQGMVEGVE AESGEVVGVV SDTGMLYKAK KVILSTGTFL KGLIHIGDSH YSAGRMNEFA 181 SINLVTSLHK LGFETERLKT GTPARLDVGT IDFSKLEEQG GDNPPKPFSF ETKEILLPQV 241 PCFITYTNEN THNIIRENMH RSPLYGGIIE GIGPRYCPSI EDKVKKFPHK DRHQIFLEPE 301 GLKSREYYAN GFSSSLPIDV QIAMYRSVPG LEKVEFVRPA YAIEYDFVQP TALHPTMETK 361 HVKGLYFTGQ LNGTSGYEEA AAQGLVAGIN AVLAVDGKEP FIVKRDESYI GVMCDDLVNK 421 GVDEPYRMFS SRAEYRLWLR EDNAEYRLLE KGYDLGLISK TRYERFQKEK EAFENEFSRL 481 NNFEITPSKD NLEILAEYNI APRTKTNAKE ILRRPELTYA DIKKMFGGTD DEKISEQVEI 541 AVKYEGYLNK QKEEIEKFNR TENVKLPDDI RYDDIQGLRR EYIEKLNTIR PQTLGQASRI 601 KGMTPAAVSL LHIYITGKK //