LOCUS ADD68974.1 763 aa PRT BCT 10-SEP-2019 DEFINITION Denitrovibrio acetiphilus DSM 12809 methyl-accepting chemotaxis sensory transducer protein. ACCESSION CP001968-2167 PROTEIN_ID ADD68974.1 SOURCE Denitrovibrio acetiphilus DSM 12809 ORGANISM Denitrovibrio acetiphilus DSM 12809 Bacteria; Deferribacteres; Deferribacterales; Geovibrionaceae; Denitrovibrio. REFERENCE 1 (bases 1 to 3222077) AUTHORS Kiss,H., Lang,E., Lapidus,A., Copeland,A., Nolan,M., Glavina Del Rio,T., Chen,F., Lucas,S., Tice,H., Cheng,J.F., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Spring,S., Rohde,M., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460) JOURNAL Stand Genomic Sci 2 (3), 270-279 (2010) PUBMED 21304711 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3222077) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S., Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Denitrovibrio acetiphilus DSM 12809 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3222077) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S., Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAR-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4083324 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Denitrovibrio acetiphilus N2460, DSM 12809 Culture Collection ID :: DSM 12809 GOLD Stamp ID :: Gi02322 Greengenes ID :: 43329 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 7.84x Sanger, 27.5x pyrosequence Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Oil reservoir model column Isolation Country :: Norway Oxygen Requirement :: Anaerobe Cell Shape :: Vibrio-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water, Marine ##Metadata-END## FEATURES Qualifiers source /organism="Denitrovibrio acetiphilus DSM 12809" /mol_type="genomic DNA" /strain="DSM 12809" /culture_collection="DSM:12809" /type_material="type strain of Denitrovibrio acetiphilus" /db_xref="taxon:522772" /note="type strain of Denitrovibrio acetiphilus" protein /locus_tag="Dacet_2212" /inference="protein motif:PFAM:PF00015" /note="KEGG: spc:Sputcn32_0619 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer" /transl_table=11 /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" BEGIN 1 MRLRLSIKQV VSITAYIGIL LITIVLAGYD YVSYRANLYD DTRKVMSDVA NSLSDDLNEK 61 LNNLALSVRT IASDKDTARI LAEGDRGALE DKYLELFNSI KDEYGIAQFQ FHTPPAKSFL 121 RLHKPEKYDD DLSGFRQTVV ESNKQQKPIV GLEVGRGGPG LRAVFPISYE GKHYGSVEYG 181 GSIIHTVENI QKTFKMDYAI GIKKSVFEKA RRFETESTDI VKGDIVYYKY THDNTKELLD 241 MFEPGKTLKV DGHKIMTAKT ELKDFQGNDI GNVIFFRDVS ARLTSSLEYA VKKFIAGFVM 301 ASAFAVFLYY FMQYYLKLLA TMSRIIEAVT KGHGDLSKRL PVKKDGNELE SVSFKMNGFL 361 DTMDQNIART TYSLGNLLTK IMPIYYALVE VRKSSNENVD LAATVAAAGE EMSITVEEIS 421 RNTADVASKG EKTLALAQEG SDIVREATIK SENVKEVVLS LSGDINSLTE NARNIGSVVE 481 VINDISEQTN LLALNAAIEA ARAGEAGRGF AVVADEVRKL AEKTLASTNE IEKMVKVIQE 541 NVARADKNAV EVSDSIAEQV RTSENANARF QEILSSVEEL NSLLLNTSTA AEQQASATAE 601 VASNIERVAE ASNQSRQNVM GLMEQIDGLM DDLSTLEKDL IQYELSCKGI VFVKAKMAHI 661 KYLKNVFTAF MSGTQPVGLR SDHECDFGKL YFSKELQGLY KNDPDFKAIE KPHQRVHALS 721 HHVSEMISKG DMNKAYDDLM EMHENVSQLI GYLEKMFVKA KCI //