LOCUS       ADD68177.1               371 aa    PRT              BCT 10-SEP-2019
DEFINITION  Denitrovibrio acetiphilus DSM 12809 peptide chain release
            factor 2 protein.
ACCESSION   CP001968-1370
PROTEIN_ID  ADD68177.1
SOURCE      Denitrovibrio acetiphilus DSM 12809
  ORGANISM  Denitrovibrio acetiphilus DSM 12809
            Bacteria; Deferribacteres; Deferribacterales; Geovibrionaceae;
            Denitrovibrio.
REFERENCE   1  (bases 1 to 3222077)
  AUTHORS   Kiss,H., Lang,E., Lapidus,A., Copeland,A., Nolan,M., Glavina Del
            Rio,T., Chen,F., Lucas,S., Tice,H., Cheng,J.F., Han,C., Goodwin,L.,
            Pitluck,S., Liolios,K., Pati,A., Ivanova,N., Mavromatis,K.,
            Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J.,
            Jeffries,C.D., Detter,J.C., Brettin,T., Spring,S., Rohde,M.,
            Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V.,
            Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P.
  TITLE     Complete genome sequence of Denitrovibrio acetiphilus type strain
            (N2460)
  JOURNAL   Stand Genomic Sci 2 (3), 270-279 (2010)
   PUBMED   21304711
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3222077)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T.,
            Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
            Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S.,
            Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of Denitrovibrio acetiphilus DSM 12809
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3222077)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T.,
            Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
            Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S.,
            Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2010) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4083324
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Denitrovibrio acetiphilus N2460, DSM 12809
            Culture Collection ID :: DSM 12809
            GOLD Stamp ID         :: Gi02322
            Greengenes ID         :: 43329
            Funding Program       :: DOE-GEBA 2007
            Sequencing Depth      :: 7.84x Sanger, 27.5x pyrosequence
            Gene Calling Method   :: Prodigal, GenePRIMP
            Isolation Site        :: Oil reservoir model column
            Isolation Country     :: Norway
            Oxygen Requirement    :: Anaerobe
            Cell Shape            :: Vibrio-shaped
            Motility              :: Motile
            Sporulation           :: Nonsporulating
            Temperature Range     :: Mesophile
            Gram Staining         :: gram-
            Biotic Relationship   :: Free living
            Diseases              :: None
            Habitat               :: Fresh water, Marine
            ##Metadata-END##
FEATURES             Qualifiers
     source          /organism="Denitrovibrio acetiphilus DSM 12809"
                     /mol_type="genomic DNA"
                     /strain="DSM 12809"
                     /culture_collection="DSM:12809"
                     /type_material="type strain of Denitrovibrio acetiphilus"
                     /db_xref="taxon:522772"
                     /note="type strain of Denitrovibrio acetiphilus"
     protein         /locus_tag="Dacet_1407"
                     /inference="protein motif:TFAM:TIGR00020"
                     /note="KEGG: geo:Geob_3093 hypothetical protein; TIGRFAM:
                     peptide chain release factor 2; PFAM: Class I peptide
                     chain release factor; PCRF domain protein"
                     /transl_table=11
                     /db_xref="InterPro:IPR000352"
                     /db_xref="InterPro:IPR004374"
                     /db_xref="InterPro:IPR005139"
BEGIN
        1 MIIEDIINEL DGLKKDINSF RTAMNEDELK KAISEVDNLS MSDPNFWNSK ESKVLMKEQA
       61 INKKKLEEWH ELTGLLEDTE VLIELYKEGE QGVEADIETS IRTLEKTIAH FELKLVLSGQ
      121 NDGNNAIITI NSGAGGTEAN DWAAMLYRMY THYAERNGYK CDILDYMEGE EAGIKNATIN
      181 IKGAFTYGYL KGETGVHRLV RISPYDSANR RHTSFAAVFV MPEIEDDIEI DISEADLHID
      241 TYRASGAGGQ HVNTTDSAVR ITHVPTGTVV TCQSERSQHK NKAHAMKILK SRLYELEIDK
      301 KNEEKQKLES TKTEIGWGNQ IRSYVMHPYK MVKDLRTRHE TGNVDAVMDG NLDAFIRAYL
      361 LHTAGINTDE Q
//