LOCUS ADD67792.1 560 aa PRT BCT 10-SEP-2019 DEFINITION Denitrovibrio acetiphilus DSM 12809 methyl-accepting chemotaxis sensory transducer protein. ACCESSION CP001968-985 PROTEIN_ID ADD67792.1 SOURCE Denitrovibrio acetiphilus DSM 12809 ORGANISM Denitrovibrio acetiphilus DSM 12809 Bacteria; Deferribacteres; Deferribacterales; Geovibrionaceae; Denitrovibrio. REFERENCE 1 (bases 1 to 3222077) AUTHORS Kiss,H., Lang,E., Lapidus,A., Copeland,A., Nolan,M., Glavina Del Rio,T., Chen,F., Lucas,S., Tice,H., Cheng,J.F., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Spring,S., Rohde,M., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460) JOURNAL Stand Genomic Sci 2 (3), 270-279 (2010) PUBMED 21304711 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3222077) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S., Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Denitrovibrio acetiphilus DSM 12809 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3222077) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Kiss,H., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Lang,E., Spring,S., Kopitz,M., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAR-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4083324 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Denitrovibrio acetiphilus N2460, DSM 12809 Culture Collection ID :: DSM 12809 GOLD Stamp ID :: Gi02322 Greengenes ID :: 43329 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 7.84x Sanger, 27.5x pyrosequence Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Oil reservoir model column Isolation Country :: Norway Oxygen Requirement :: Anaerobe Cell Shape :: Vibrio-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water, Marine ##Metadata-END## FEATURES Qualifiers source /organism="Denitrovibrio acetiphilus DSM 12809" /mol_type="genomic DNA" /strain="DSM 12809" /culture_collection="DSM:12809" /type_material="type strain of Denitrovibrio acetiphilus" /db_xref="taxon:522772" /note="type strain of Denitrovibrio acetiphilus" protein /locus_tag="Dacet_1016" /inference="protein motif:PFAM:PF00015" /note="KEGG: aha:AHA_2458 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein" /transl_table=11 /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR013163" BEGIN 1 MKMSVKTKVT LLSALPVILT VFIMTTFFYL QISKLGNSEI SSFKNSMMNS KKNELKSYLE 61 IAFSAIESIY QNADSNDPAA KQKAADVLMS LHYGDDGYFF ATDYNSVVKS HRLNPELVGQ 121 NMSDFQDSNG VRLFEELVKV AKNGSGFVQY VWPKASKNAE VAKLSYSLGL DKWNWIIGTG 181 FYIDDIQDAV AVKQEQLEKQ ITTLFTTVVI IALLIIAGVT GISFFFSNLM TKSIILANRF 241 LKEVSDGEGD LTKALPVLSQ DEVGMMSTHF NIFIQKLNDI ISVVKESSQS VASGSTELAS 301 ATEELSVTMQ DQASQITSVA SATEEITVSS NEVLQALQEA NQQTANADRL TAEGKSKLLS 361 SVNEVMEIKE RVEKLGTTIG NLSESSAEIG NIISVINDIA DQTNLLALNA AIEAARAGEH 421 GRGFAVVADE VRKLAERTQT ATKEIETIIG SLQSETKNAN KDMQETTHKV VEGAEAIKET 481 ESIFEQIVSS VESIHTTNDI ITGSIEEQVT AINNINDNAQ VISAGIEQSS TAVSEITKTV 541 VDLQQQADDL HMLVDKFKTK //