LOCUS ADD39132.1 1370 aa PRT VRL 12-OCT-2016
DEFINITION Human betaherpesvirus 5 major capsid protein protein.
ACCESSION GU937742-82
PROTEIN_ID ADD39132.1
SOURCE Human betaherpesvirus 5 (HHV-5)
ORGANISM Human betaherpesvirus 5
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota;
Herviviricetes; Herpesvirales; Orthoherpesviridae;
Betaherpesvirinae; Cytomegalovirus; Cytomegalovirus humanbeta5.
REFERENCE 1 (bases 1 to 235404)
AUTHORS Davison,A.J., Akter,P., Cunningham,C., Dolan,A., Addison,C.,
Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D. and
Wilkinson,G.W.
TITLE Homology between the human cytomegalovirus RL11 gene family and
human adenovirus E3 genes
JOURNAL J. Gen. Virol. 84 (PT 3), 657-663 (2003)
PUBMED 12604818
REFERENCE 2 (bases 1 to 235404)
AUTHORS Akter,P., Cunningham,C., McSharry,B.P., Dolan,A., Addison,C.,
Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D.,
Wilkinson,G.W. and Davison,A.J.
TITLE Two novel spliced genes in human cytomegalovirus
JOURNAL J. Gen. Virol. 84 (PT 5), 1117-1122 (2003)
PUBMED 12692276
REFERENCE 3 (bases 1 to 235404)
AUTHORS Dolan,A., Cunningham,C., Hector,R.D., Hassan-Walker,A.F., Lee,L.,
Addison,C., Dargan,D.J., McGeoch,D.J., Gatherer,D., Emery,V.C.,
Griffiths,P.D., Sinzger,C., McSharry,B.P., Wilkinson,G.W. and
Davison,A.J.
TITLE Genetic content of wild-type human cytomegalovirus
JOURNAL J. Gen. Virol. 85 (PT 5), 1301-1312 (2004)
PUBMED 15105547
REFERENCE 4 (bases 1 to 235404)
AUTHORS Davison,A.J.
TITLE Human cytomegalovirus RL11 gene family: variation, recombination
and transcription
JOURNAL Unpublished
REFERENCE 5 (bases 1 to 235404)
AUTHORS Davison,A.J.
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2010) MRC Virology Unit, Church Street, Glasgow
G11 5JR, UK
REFERENCE 6 (bases 1 to 235404)
AUTHORS Davison,A.J.
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2016) MRC Virology Unit, Church Street, Glasgow
G11 5JR, UK
REMARK Sequence update by submitter
COMMENT On Oct 12, 2016 this sequence version replaced GU937742.1.
The original gene nomenclature has been retained. Genes presumably
inherited from the common ancestor of alpha-, beta- and
gammaherpesviruses (core genes), from the common ancestor of beta-
and gammaherpesviruses (betagamma genes), or from the common
ancestor of betaherpesviruses (beta genes) are indicated. A
standard protein nomenclature has been applied so that orthologs
have the same name in all herpesviruses.
FEATURES Qualifiers
source /organism="Human betaherpesvirus 5"
/mol_type="genomic DNA"
/strain="Toledo"
/isolation_source="urine from a congenitally infected
infant"
/host="Homo sapiens"
/db_xref="taxon:10359"
/country="USA"
/collection_date="1984"
/note="passaged several times in human fibroblasts;
contains inversion of 14336 bp region (genes UL128 to
UL133); 3 genes are mutated (RL13, UL9 and UL128);
acronym: HCMV; acronym: HHV-5"
protein /gene="UL86"
/note="6 copies form hexons, 5 copies form pentons;
involved in capsid morphogenesis"
BEGIN
1 MENWSALELL PKVGIPTDFL THVKTSAGEE MFEALRIYYG DDPERYNIHF EAIFGTFCNR
61 LEWVYFLTSG LAAAAHAIKF HDLNKLTTGK MLFHVQVPRV ASGAGLPTSR QTTIMVTKYS
121 EKSPITIPFE LSAACLTYLR ETFEGTILDK ILNVEAMHTV LRALKNTADA MERGLIHSFL
181 QTLLRKAPPY FVVQTLVENA TLARQALNRI QRSNILQSFK AKMLATLFLL NRTRDRDYVL
241 KFLTRLAEAA TDSILDNPTT YTTSSGAKVS GVMVSTANVM QIIMSLLSSH ITKETVSAPA
301 TYGNFVLSPE NAVTAISYHS ILADFNSYKA HLTSGQPHLP NDSLSQAGAH SLTPLSMDVI
361 RLGEKTVIME NLRRVYKNTD TKDPLERNVD LTFFFPVGLY LPEDRGYTTV ESKVKLNDTV
421 RNALPTTAYL LNRDRAVQKI DFVDALKTLC HPVLHEPAPC LQAFTERGPP SEPAMQRLLE
481 CRFQQEPMGG AARRIPHFYR VRREVPRTVN EIKQDFVVTD FYKVGNITLY TELHPFFDFT
541 HCQENSETVA LCTPRIVIGN LPDGLAPGPF HELRTWEIME HMRLRPPPDY EETLRLFKTT
601 VTSPNYPELC YLVDVLVHGN ADAFLLIRAF IARCIVNMFH TRQLLVFAHS YALVTLIAEH
661 LADGALPPQL LFHYRNLVAV LRLVTRISAL PGLNNGQLAE EPLSAYVNAL HDHRLWPPFV
721 THLPRNMEGV QVVADRQPLN PANIEARHHG VSDVPRLGAM DADEPLFVDD YRATDDEWTL
781 QKVFYLCLIP AMTNNRACGL GLNLKTLLVD LFYRPAFLLM PAATAVSTSG TTSKESTSGV
841 TPEDSVAAQR QAVGEMLTEL VEDVATDAHT PLLQACRELF LAVQFVGEHV KVLEVRAPLD
901 HAQRQGLPDF ISRQHVLYNG CCVVTAPKTL IEYSLPVPFH RFYSNPTICA ALSDDIKRYV
961 TEFPHYHRHD GGFPLPTAFA HEYHNWLRSP FSRYSATCPN VLHSVMTLAA MLYKISPVSL
1021 VLQTKAHIHP GFALTAVRTD TFEVDMLLYS GKSCTSVIIN NPIVTKEERD ISTTYHVTQN
1081 INTVDMGLGY TSNTCVAYVN RVRTDMGVRV QDLFRVFPMN VYRHDEVDRW IRHAAGVERP
1141 QLLDTETISM LTFGSMSERN AAATVHGQKA VCELILTPVT MDVNYFKITN NPRGRASCML
1201 GVDPYDTEAA TKAIYDHREA DAQTFAATHN PWASQAGCLS DVLYNTRHRE RLGYNSKFYS
1261 PCAQYFNTEE IIAANKTLFK TIDEYLLRAK DCIRGDTDTQ YVCVEGTEQL IENPCRLTQE
1321 ALPILSTTTL ALMETKLKGG AGAFATSETH FGNYVVGEII PLQQSMLFNS
//