LOCUS ADD39117.1 850 aa PRT VRL 12-OCT-2016 DEFINITION Human betaherpesvirus 5 DNA packaging terminase subunit 2 protein. ACCESSION GU937742-62 PROTEIN_ID ADD39117.1 SOURCE Human betaherpesvirus 5 (HHV-5) ORGANISM Human betaherpesvirus 5 Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Betaherpesvirinae; Cytomegalovirus; Cytomegalovirus humanbeta5. REFERENCE 1 (bases 1 to 235404) AUTHORS Davison,A.J., Akter,P., Cunningham,C., Dolan,A., Addison,C., Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D. and Wilkinson,G.W. TITLE Homology between the human cytomegalovirus RL11 gene family and human adenovirus E3 genes JOURNAL J. Gen. Virol. 84 (PT 3), 657-663 (2003) PUBMED 12604818 REFERENCE 2 (bases 1 to 235404) AUTHORS Akter,P., Cunningham,C., McSharry,B.P., Dolan,A., Addison,C., Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D., Wilkinson,G.W. and Davison,A.J. TITLE Two novel spliced genes in human cytomegalovirus JOURNAL J. Gen. Virol. 84 (PT 5), 1117-1122 (2003) PUBMED 12692276 REFERENCE 3 (bases 1 to 235404) AUTHORS Dolan,A., Cunningham,C., Hector,R.D., Hassan-Walker,A.F., Lee,L., Addison,C., Dargan,D.J., McGeoch,D.J., Gatherer,D., Emery,V.C., Griffiths,P.D., Sinzger,C., McSharry,B.P., Wilkinson,G.W. and Davison,A.J. TITLE Genetic content of wild-type human cytomegalovirus JOURNAL J. Gen. Virol. 85 (PT 5), 1301-1312 (2004) PUBMED 15105547 REFERENCE 4 (bases 1 to 235404) AUTHORS Davison,A.J. TITLE Human cytomegalovirus RL11 gene family: variation, recombination and transcription JOURNAL Unpublished REFERENCE 5 (bases 1 to 235404) AUTHORS Davison,A.J. TITLE Direct Submission JOURNAL Submitted (26-FEB-2010) MRC Virology Unit, Church Street, Glasgow G11 5JR, UK REFERENCE 6 (bases 1 to 235404) AUTHORS Davison,A.J. TITLE Direct Submission JOURNAL Submitted (12-OCT-2016) MRC Virology Unit, Church Street, Glasgow G11 5JR, UK REMARK Sequence update by submitter COMMENT On Oct 12, 2016 this sequence version replaced GU937742.1. The original gene nomenclature has been retained. Genes presumably inherited from the common ancestor of alpha-, beta- and gammaherpesviruses (core genes), from the common ancestor of beta- and gammaherpesviruses (betagamma genes), or from the common ancestor of betaherpesviruses (beta genes) are indicated. A standard protein nomenclature has been applied so that orthologs have the same name in all herpesviruses. FEATURES Qualifiers source /organism="Human betaherpesvirus 5" /mol_type="genomic DNA" /strain="Toledo" /isolation_source="urine from a congenitally infected infant" /host="Homo sapiens" /db_xref="taxon:10359" /country="USA" /collection_date="1984" /note="passaged several times in human fibroblasts; contains inversion of 14336 bp region (genes UL128 to UL133); 3 genes are mutated (RL13, UL9 and UL128); acronym: HCMV; acronym: HHV-5" protein /gene="UL56" /note="involved in DNA encapsidation" BEGIN 1 MEMNLLQKLC VVCSKCNEYA MELECLKYCD PNVLLAESTP FKRNAAAIVY LYRKIYPEVV 61 AQNRTQSSLL TLYLEMLLKA LHEDTALLDR ALMAYSRQPD RAAFYRTVLR LDRCDRHHTV 121 ELQFTDNVRF SVSLATLNDI ERFLCKMNYV YGILAPEAGL EVCAQLLELL RRLCGISPVA 181 RQEVYVEGTT CAQCYEELTI IPNQGRSLNK RLQGLLCNHI AVHRPSSQSD VNIQTVEQDL 241 LDLTTRIPHL AGVLSALKSL FSSSSAYHSY IQEAEEALRE YNLFTDIPER IYSLSDFTYW 301 SRTSEVIVKR VGITIQQLNV YHQLCRALMN GISRHLYGED VEDIFVLGEK ALDGEERMFV 361 GSVFAAPNRI IDLITSLSIQ AFEDNPVFNK LHESNEMYTK IKHILEEIRR PLPDGTGGDG 421 PEGEAIHLRG REAMSGTGTT LMTASNSSNS STHSQRNNGG GGRARGGGKK VVGGGVNGQD 481 GDGSENGLRV RNCDEHEALD LVDARSRIHN VTREVNVRKR AYLQKVSEVG YGKVIRCIKT 541 QERLTSKLID VNLVGPLCLD FISKLMNGFL YRSQYHQDQD VVDVGDQFTY DEHLYVVNNL 601 IHKSLPVESL PLLGQQIYEL CNGPLFTHCT DRYPLSHNVD MAYACDNAGV LPHVKDDLVK 661 CAEGTVYPSE WMVVKYMGFF NFSDCQDLNV LQKEMWMHVR ELVLSVALYN ETFGKQLSIA 721 CLRDELHPDR DVILTYNKEW PLLLRHEGSL YKSKDLYLLL YRHLSRPDES GDVPTAPVAK 781 PSTLTAAAAV SGVFREPDRP WLPSPYPSSS TAGVSRRVRA TRKRPRRASS LLDLARDEHG 841 IQDLVPGSLR //