LOCUS ACV55359.1 782 aa PRT BCT 11-DEC-2013 DEFINITION Eggerthella lenta DSM 2243 sodium/hydrogen exchanger protein. ACCESSION CP001726-1364 PROTEIN_ID ACV55359.1 SOURCE Eggerthella lenta DSM 2243 ORGANISM Eggerthella lenta DSM 2243 Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella. REFERENCE 1 (bases 1 to 3632260) AUTHORS Saunders,E., Pukall,R., Abt,B., Lapidus,A., Glavina Del Rio,T., Copeland,A., Tice,H., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Chain,P., Meincke,L., Sims,D., Brettin,T., Detter,J.C., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Han,C. TITLE Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255) JOURNAL Stand Genomic Sci 1 (2), 174-182 (2009) PUBMED 21304654 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Eggerthella lenta DSM 2243 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (02-SEP-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082980 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Eggerthella lenta VPI 0255, DSM 2243 Culture Collection ID :: DSM 2243, ATCC 25559, JCM 9979 GOLD Stamp ID :: Gc01054 Funding Program :: DOE-GEBA 2007 Number of Reads :: 39464-Sanger, 471609-454 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 10.2x Sanger; 25.3x 454 Gene Calling Method :: Prodigal Isolation Site :: Rectal tumor Collection Date :: 1938 Host Name :: Homo sapiens Host Health :: Patient with rectal tumor Body Sample Site :: Blood Oxygen Requirement :: Anaerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: Bacteremia Habitat :: Blood, Host, Human intestinal microflora Phenotypes :: Pathogen ##Metadata-END## FEATURES Qualifiers source /organism="Eggerthella lenta DSM 2243" /mol_type="genomic DNA" /strain="DSM 2243" /culture_collection="DSM:2243" /type_material="type strain of Eggerthella lenta" /db_xref="taxon:479437" protein /locus_tag="Elen_1390" /inference="protein motif:PFAM:PF00999" /note="PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bba:Bd2267 putative potassium/proton antiporter" /transl_table=11 /db_xref="InterPro:IPR006037" /db_xref="InterPro:IPR006153" BEGIN 1 MQSIPQLVND LALLLAVAAV ATIVCRRFKQ PLVLGYVVAG FLVSPAIGWI PNIVETADVS 61 TWSQIGVIFL MFGLGLQFSV VKLTTVGRPA LVTAVVEMSL MIAAGFACGT LLGWSPSTSL 121 FLGGMLAISS SSIIVKTFGE LGLRTKAFAQ LVFGVLVIED IAGVFLLVVL STVAVSASVD 181 GGAVAVRIGR MALYLVVWFA LSVILVPSAL KRLRSELNDE ILLIASIALC LGMVVLADAI 241 GFSSALGAFL AGSILAGTVQ AKRVDALFKP IKDLFGAVFF VSVGMLVTPA AVTENLGAIV 301 VIALVAIIGR SLFCGLGALL SGATLKTSVM SGLSLAQIGE FSFIIAALGS ATGVTPDFLY 361 PVIVTVSVAT TLASPLLVKN SERIYHLLVR VLPESLFALR HEHLERAQEE DGEPNLWVDY 421 LKRWTLKLGL VVLAGIASVE VLMNTALPLL SGFVPEAVLN PLLAAVGIFV TGLFLSNLFY 481 TGRKNEFGVL WMKSRRNHVP LAVLMLAGGA ASCGVVAYIV HAAGARQSVW MFVLAATCSL 541 LLARSRTLHS WFLKLETSFV GNLNESILAE RLAESDEEER AGWVEERLYV VEVEASRTLR 601 RLGAERSSDF LFGIAHNLDL MAIEREGVRM GSQALARLTK EELVRRINDP ADPLGIREGD 661 VLTFLGTENE VDAYLQTLLK EDSIDEADAV SASFDEYAAA HPDKLDLACV SLSVEAGSPF 721 AGKTIGAVDF KGSFGCLVVA HEHEKLLKMK PSRNTRLFPD DRIWLVGETA AAQALPEKDG 781 AA //