LOCUS       ACU38183.1               414 aa    PRT              BCT 24-DEC-2013
DEFINITION  Actinosynnema mirum DSM 43827 glycoside hydrolase family
            46 protein.
ACCESSION   CP001630-4209
PROTEIN_ID  ACU38183.1
SOURCE      Actinosynnema mirum DSM 43827
  ORGANISM  Actinosynnema mirum DSM 43827
            Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
            Actinosynnema.
REFERENCE   1  (bases 1 to 8248144)
  AUTHORS   Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del
            Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O.,
            Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A.,
            Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L.,
            Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C.,
            Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V.,
            Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P.
  TITLE     Complete genome sequence of Actinosynnema mirum type strain (101)
  JOURNAL   Stand Genomic Sci 1 (1), 46-53 (2009)
   PUBMED   21304636
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8248144)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
            Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
            Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of Actinosynnema mirum DSM 43827
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 8248144)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
            Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
            Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4082379
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Actinosynnema mirum 101, DSM 43827
            Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064
            GOLD Stamp ID         :: Gc01024
            Funding Program       :: DOE-GEBA 2007
            Assembly Method       :: Newbler version 1.1.02.15, Phrap
            Sequencing Depth      :: 8.9x Sanger; 20x pyrosequence
            Gene Calling Method   :: Prodigal
            Isolation Site        :: "Blade of grass from Raritan River NJ,
                                     USA"
            Collection Date       :: September 1976
            Isolation Country     :: USA
            Latitude              :: 40.491816
            Longitude             :: -74.322087
            Oxygen Requirement    :: Aerobe
            Motility              :: Nonmotile
            Sporulation           :: Sporulating
            Temperature Range     :: Mesophile
            Temperature Optimum   :: 10-30C
            Gram Staining         :: gram+
            Biotic Relationship   :: Free living
            Diseases              :: None
            Habitat               :: Soil
            Phenotypes            :: Nocardicin A producer
            Energy Source         :: Chemoorganotroph
            ##Metadata-END##
FEATURES             Qualifiers
     source          /organism="Actinosynnema mirum DSM 43827"
                     /mol_type="genomic DNA"
                     /strain="DSM 43827"
                     /type_material="type strain of Actinosynnema mirum"
                     /db_xref="taxon:446462"
     protein         /locus_tag="Amir_4331"
                     /inference="protein motif:PFAM:PF01374"
                     /note="PFAM: glycoside hydrolase family 46; Ricin B
                     lectin; SMART: Ricin B lectin; KEGG: bsu:BSU26890
                     chitosanase"
                     /transl_table=11
                     /db_xref="InterPro:IPR000400"
                     /db_xref="InterPro:IPR000772"
BEGIN
        1 MSRVKPRLAA GAGLSAAAVV GAAFLVVQPA TADGFTGPVV GLGGKCLDVA GASSANGTAV
       61 QLYTCNGTSA QSWTVDTGAK TIKALGKCLD VVDDGRHDGA LLQIWDCANV PEQRWTVDQT
      121 GRVVGQGSGK CVDVPAGNTA DGTRLQVWTC DAWSPYQRWT TPGGGTNPTT TTTSQVPGRS
      181 DLATPAKKDI AMRLVSSAEN SSLDWRAQFA YIEDIGDGRG YTAGIIGFCS GTGDMLELVE
      241 HYTSVKPNNA LAGYLPALRR VNGTPSHEGL DPGFQQAWRT AAQDPVFQQA QETERDRVYF
      301 TPSVNQAKSD GLRALGQFAY YDAIVMHGGG TDQASFGTIR RKAMARAKTP AQGGDETAYL
      361 HAFLDERVVA MKLEEAHEDT SRVDTAQRVF LNNGNLDLNT PLAWKVYGDP FRID
//