LOCUS ACU37701.1 1243 aa PRT BCT 24-DEC-2013 DEFINITION Actinosynnema mirum DSM 43827 Cna B domain protein protein. ACCESSION CP001630-3727 PROTEIN_ID ACU37701.1 SOURCE Actinosynnema mirum DSM 43827 ORGANISM Actinosynnema mirum DSM 43827 Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema. REFERENCE 1 (bases 1 to 8248144) AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O., Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C., Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Actinosynnema mirum type strain (101) JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009) PUBMED 21304636 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Actinosynnema mirum DSM 43827 JOURNAL Unpublished REFERENCE 3 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082379 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Actinosynnema mirum 101, DSM 43827 Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064 GOLD Stamp ID :: Gc01024 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 8.9x Sanger; 20x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: "Blade of grass from Raritan River NJ, USA" Collection Date :: September 1976 Isolation Country :: USA Latitude :: 40.491816 Longitude :: -74.322087 Oxygen Requirement :: Aerobe Motility :: Nonmotile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 10-30C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: Nocardicin A producer Energy Source :: Chemoorganotroph ##Metadata-END## FEATURES Qualifiers source /organism="Actinosynnema mirum DSM 43827" /mol_type="genomic DNA" /strain="DSM 43827" /type_material="type strain of Actinosynnema mirum" /db_xref="taxon:446462" protein /locus_tag="Amir_3822" /inference="protein motif:PFAM:PF05738" /note="PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein" /transl_table=11 /db_xref="InterPro:IPR008454" BEGIN 1 MRASRFSSSA ACLGLLSALL VALPQQAASA PARDLELLYS AESYGDFLVV GNGNTRCPDP 61 GDPVDPLAGV PVATCPDARA KSGVDPARTR GAYFTRWADV DGDTSTFDSS SAELTIPDGA 121 FVDYARLTWS GNTGTVLQAD SSATSGCDAR QQGAGVVLPE LPPEADIPVS SADVTPAFLR 181 VQGVPAANVY AEDYTEDDLG SLAPEQAQLY SAGAEVTSVL AAAPTGVPLA IGVGNVWTPE 241 GFGCFGGWSL TVAYSYDAPD PNAPYKTQVQ LRSGHVRVSP GAGPHQVTAP GLRTSAQRTL 301 LGVTAFGGDH DRAGDRVLVD SAAQPGLGTQ GNYFSGGVDG ATAPADANTM GADVHSFVSG 361 DVLTAPPGGT QDLAFRFEPG GDDYVLTDLA VSTPVDTGVV SGRVFNDRND NGVYEPSDGD 421 TGIGNVRLTL EGDAPVLPSA IPERFTAPDG TYRFDGVGEG AYTLTEFQPA DYADGIDTPH 481 FNAVALGDDR FRIGFLSDLD ASTDNLFAEL AGGELSGTVR AGGAGVPNAL VRLTGDNGLS 541 LDVTTTSTGA YSFPRLPAGD YTLLNTHPGG YADVSASAGT AGGTVTGRNS VTGIALTPDQ 601 VGTDYDFLLA RAASITGRVT DQAGNGIPDV RLDLTGPVDL TTTTAVDGGF SFSPLPPGSY 661 TVTETQPAGY GQGGATAGDA GGVVGVDVIS AITLVENQQA IGYVFAESAA SVSGTVFADG 721 NRNGLADPTE LGLDGVRVDL VGPGGTLTTT TSAGGRYSFT ALAAGTYEVV ERRPVGYARG 781 AVVVGSAGGA VAGDGVTGIV LGAATAATGY DFAELPGSLA GALYVDADGD GARQPGEGGV 841 SGVQVTLLGV DAAGQGVTRT ATTGADGGYA FPDLLAGAYT VLRGPWSGYA DGEDRAGTAG 901 GTPVAPDAIS GIALPAGAQA VGYLFAALVS DVTGVVFLDD DGDGVLDPEE TGRLSGVVVS 961 LDDGLGRRVR TAVTGADGRY LFPAVQPGDY VLAEEQPAGH GSSTPDRVAL TVGLGAVVDF 1021 GEELGALGGL AWQDADGDGV RDADEPGAPG VAVALEGAAT STGATGPDGR YDFRDLAPGS 1081 YRVRITPPAG TRVRVGSAFD PVTLTSGDVV VQVVGADITQ RADLDAALVP VEQPVDPPVV 1141 PPVDPPVDPP VEPQPPVDPV DPPTSPGPAE PVAPVDQGAL VDEAGPSGPA GNAPPPDQGW 1201 ESGREPVQGL AGTGARGVLP LLALSASALL AGLVLALRAR RRA //