LOCUS ACU37568.1 2109 aa PRT BCT 24-DEC-2013
DEFINITION Actinosynnema mirum DSM 43827 amino acid adenylation domain
protein protein.
ACCESSION CP001630-3594
PROTEIN_ID ACU37568.1
SOURCE Actinosynnema mirum DSM 43827
ORGANISM Actinosynnema mirum DSM 43827
Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
Actinosynnema.
REFERENCE 1 (bases 1 to 8248144)
AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del
Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O.,
Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A.,
Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C.,
Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P.
TITLE Complete genome sequence of Actinosynnema mirum type strain (101)
JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009)
PUBMED 21304636
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 8248144)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Actinosynnema mirum DSM 43827
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 8248144)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082379
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Actinosynnema mirum 101, DSM 43827
Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064
GOLD Stamp ID :: Gc01024
Funding Program :: DOE-GEBA 2007
Assembly Method :: Newbler version 1.1.02.15, Phrap
Sequencing Depth :: 8.9x Sanger; 20x pyrosequence
Gene Calling Method :: Prodigal
Isolation Site :: "Blade of grass from Raritan River NJ,
USA"
Collection Date :: September 1976
Isolation Country :: USA
Latitude :: 40.491816
Longitude :: -74.322087
Oxygen Requirement :: Aerobe
Motility :: Nonmotile
Sporulation :: Sporulating
Temperature Range :: Mesophile
Temperature Optimum :: 10-30C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: Nocardicin A producer
Energy Source :: Chemoorganotroph
##Metadata-END##
FEATURES Qualifiers
source /organism="Actinosynnema mirum DSM 43827"
/mol_type="genomic DNA"
/strain="DSM 43827"
/type_material="type strain of Actinosynnema mirum"
/db_xref="taxon:446462"
protein /locus_tag="Amir_3684"
/inference="protein motif:TFAM:TIGR01733"
/note="TIGRFAM: amino acid adenylation domain protein;
PFAM: AMP-dependent synthetase and ligase;
phosphopantetheine-binding; condensation domain protein;
KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase"
/transl_table=11
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR001242"
/db_xref="InterPro:IPR006162"
/db_xref="InterPro:IPR006163"
/db_xref="InterPro:IPR010071"
BEGIN
1 MVEQENPEFA VSPRQRALWS QHADRGDDNA GQAHVLLEGA VERDRLSAAL REVVGDHEAL
61 RTGFVSHEGR RAPSQVVGDP AAVRLRHVEQ AVGPDRDVAE WAALEREAVG TGAGEGFRAL
121 LVETGVDRAT LLLTAHPLIA DLTSLQLVVA ELAAVYDGAA ESAGESAADA VQYADFSTWH
181 NELLTSPDSA ADRAAWDDAL AGDGGEALPR TTVGGSQGRL RSFRLPAAPC GPALDAFAAE
241 HAVDVEAVLA AVFRVVVWRV GGERGGPVLL SVPGRGFPGL ERAVGAYERE APLRGDLTAD
301 QVFLTVVRDT AEWTGWAGQR VEHLDPELLE DGAARRVLPR FSFHACGPAR GAGPVWSVTG
361 LAQDDSGALS LTCVLVGEEL QVTLRHDAGL VDGATASAVA DAFGTVLAAA LADGATPVGA
421 FDLMPPRRRE SVLAASAGPV VELPDLAVHE LFTRQAELTP DRVAVEFDGL ELTYAQLDGM
481 ANQLAHLLRE RGVGRGDRVV ISLGRSPELL VSVLGVLKAG AAFVPVDVGY PSARLALVVE
541 QTTPKVVLAT ADVLGCLDPP PPSALALDDT SAVLAGQPTG PLQVPLVGDD IAYVLHTSGT
601 TGRPNGVLVP HRGLVNYLSW AVTAYQLDRG AGALVHTSIS FDLTLTGLLG PLLVGQRVVL
661 LPESAGVTGL AGALRARRDL TLVKLTPTHL DVLGQLFTAE EIAGSVRTVV VGGEALRTRS
721 AAPFLDAGST VVNEYGPTET VVGSIAGRVD AAAPRGGMAP IGAPVANTRA HLLDPRGDQV
781 PDGAVGEIFL GGAGVALGYL GLPELTEQRF VPDPFGTPGE RLYRTGDLAR RRADGDIEYL
841 GRLDEQVKVR GVRVEPGEVE ELLRAHPGVG QAVVVARRDE DLGGSSPLAG ELQLVGYVVP
901 DRRGGSPAPS PAALVRHCRE QLPEPMVPSA VVLLDALPAT ANGKLDRAAL PKPAKESRRS
961 AEYVAPRTET EEILVGAVAT VLGVDRVGVA DNYFLLGGDS IRSVMVASRA QASGLDVTVA
1021 TLHDNPVIAD CAAALDGRRP QAGPPTTPPF ALIPEEDRQA LPAEVEDAFP LSLLQEGMIF
1081 HRDFAAKSAV YHAIASVRLR APFDLDVMRT VVRQLVERHP MLRTSFDMTT YSRPLQLVHG
1141 RFETPLLFED LRGLPEPEQE ERVTAWVDRE RTVGFELHDH PLIRFMVHLR GDGDFQFTYG
1201 FHHEIVDGWS EALMITELFS HYFSLVYDEP ISIKPPTSGM RDAVALELEA LGRKENYDFW
1261 DGYLADATLM RLPRDGVGPK ADKGDREIVR IVVPVGRELS DGLKRVATGL AVPLKSVLLA
1321 AHLAVMSAYG GNVDTLTYTV TNGRPETIDG STAIGLFVNS LALRVRMAGG SWRKLIEDTL
1381 RSERVSMPYR RLPMAELKRH QGNEPLAETL FFFTNYHVFS VLDRWTERGV AHVENELYGE
1441 STFPFCGIFR LHRESGELEV RIEYDSLQFS AEVMESVRDS YVLAMEAIAA DPSAHFDAAD
1501 QLPDRDRELL EGFTLGEVVP VPDAGLHEAF AARAAATPDR IAVEADGVAL SYRTLDEWAC
1561 RIARGLRLRG VGCDDVVGVF AERSPLQIAS LLGVLKAGAA YLPLDPVQPD ERTAALVAGS
1621 GAAVVIAERG LEPRAPRGCP LFVPDRDLTG ARAKPTPVSG AGAAYVIYTS GSTGEPKGVV
1681 VEHRNVLASI QARSVAYPET PERFLLLSSF AFDSSVAGVF WTLTTGGTLI LPAEGTQLDP
1741 VGTVGAVVRA RPTHTLGIPS LLGPLLEQAV PGELAPLARV ITAGEAAPAA LHQECREKAP
1801 GCLLSNEYGP TEATVWSTVW TGAPEAGQQQ LPIGRPIANT RILVQDQHGR STPVSVSGEL
1861 HIGGAGVARG YLGRPADTAA VFQPDPHSPE PGARRYATGD LGRFLPDGDL ELLGRIDHQV
1921 KIRGFRVEPA EVEAVLDAHP ALQRSVVIAR GGDGEKQLVA YVVPEEGERP AQAELQQHVR
1981 DRLPRYMVPS ACVILDAVPL TSTGKVDRAR LPEPEQASEL PHTAPRTETE QLLTDIWSAV
2041 LKLDRVGVHH HFFDIGGESL RAMQVIAATN KLFGTTLSVR KLMDAPTIAE FAREVDGARS
2101 PAAAGSGRG
//