LOCUS ACU37564.1 2721 aa PRT BCT 24-DEC-2013
DEFINITION Actinosynnema mirum DSM 43827 amino acid adenylation domain
protein protein.
ACCESSION CP001630-3590
PROTEIN_ID ACU37564.1
SOURCE Actinosynnema mirum DSM 43827
ORGANISM Actinosynnema mirum DSM 43827
Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
Actinosynnema.
REFERENCE 1 (bases 1 to 8248144)
AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del
Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O.,
Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A.,
Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C.,
Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P.
TITLE Complete genome sequence of Actinosynnema mirum type strain (101)
JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009)
PUBMED 21304636
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 8248144)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Actinosynnema mirum DSM 43827
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 8248144)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082379
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Actinosynnema mirum 101, DSM 43827
Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064
GOLD Stamp ID :: Gc01024
Funding Program :: DOE-GEBA 2007
Assembly Method :: Newbler version 1.1.02.15, Phrap
Sequencing Depth :: 8.9x Sanger; 20x pyrosequence
Gene Calling Method :: Prodigal
Isolation Site :: "Blade of grass from Raritan River NJ,
USA"
Collection Date :: September 1976
Isolation Country :: USA
Latitude :: 40.491816
Longitude :: -74.322087
Oxygen Requirement :: Aerobe
Motility :: Nonmotile
Sporulation :: Sporulating
Temperature Range :: Mesophile
Temperature Optimum :: 10-30C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: Nocardicin A producer
Energy Source :: Chemoorganotroph
##Metadata-END##
FEATURES Qualifiers
source /organism="Actinosynnema mirum DSM 43827"
/mol_type="genomic DNA"
/strain="DSM 43827"
/type_material="type strain of Actinosynnema mirum"
/db_xref="taxon:446462"
protein /locus_tag="Amir_3680"
/inference="protein motif:TFAM:TIGR01733"
/note="TIGRFAM: amino acid adenylation domain protein;
PFAM: AMP-dependent synthetase and ligase;
phosphopantetheine-binding; condensation domain protein;
KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase"
/transl_table=11
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR001242"
/db_xref="InterPro:IPR006162"
/db_xref="InterPro:IPR006163"
/db_xref="InterPro:IPR010071"
BEGIN
1 MSTRTGTDHV RGRRGTIIDI ARRHAEDTPS RPAYLFLADG VTESASHDFA GVDRRARAIA
61 AELTARGLRG ERVLIAYPSG MAYVESFLGC LYAGAVAVPC DSGRGTAGAE RLAAIRADAE
121 PVLALRDPAG GSGQLTGLPA LHVADVPDSA AGHWRHPGVG QDEVAFLQYT SGSTRTPSGV
181 RVTHANVLAN EHAIQVACGN DRDSHFVGWL PLFHDMGLIA NVLQPLYLGS RSVLMPPEAF
241 VRSPLAWLRA VERYRARVSG GPNFAYELCL SRIGERDRAG LDLSGWTVAY NGAEPVRHET
301 LRRFTEGFRS AGFAPTAHFP CYGLAEATLI VTSTPTAEPP TTLRADPAAL RAGKLTGVAE
361 DEPGATLVSC GPAVPGTEVE IVDPVTRSPV PAGGIGEVWL RGDGVAAGYW NRPAETEETF
421 AAHLAGTRDR PYLRTGDLGA LVENRLYITG RRKDVIVIRG ENHLPQDLEH TAERAAPALR
481 PSCGAAIAVD VDGVESVVLC HELISPQEEH DLDAIATRVR RAVAGAHGVE CRHVVFVAKG
541 GIPKTTSGKV RRQLCRLLYL NGELPVLRVV SASRAAAPDL PDLAEIAALD PEARREELAA
601 ALGRTAAALA SDAETAPGAD EPLARFGLDS LGAVELRHLV QRRYGVDLGA TALADQASPD
661 DLATLILSAD NRKSPAAPEI EGASPDHGPL PLTEGQRALW FEHELDPAGA AYTLSRVLRI
721 EGPLDPDVLS RALDALVARH PALRTSFPVD QDGPRRLVSP TGPHLQSVDA SADADAELTA
781 RLLELAERPF DLSSAPPFAA TLVRRDERTH LLVLVAHHLV MDLWSFLVVL DELRASCEAR
841 STPVPTTSTG RRDPHETALA ETADYLRSPA HDRDRDFWRR ALAQAPSALE LPADRPRPQH
901 RDFRGATEGF RLPAELVRDL RAFARQRSCT LFTVLLTAYR ALLHRYTGQS DLVLGTLLAG
961 RDTADLADAV GYFIRTVPLR SRCGREDSFD ALLADSGRLL RDAVDHGRYP LRHMVAELSP
1021 DRDAGRPTLV QTQFVLQQEY GERRGGTFGL AQGSEDRVGL GTATITPVEL PRRWSQLDLS
1081 LSMAQLGDGL TGCWEYRTGL FDRATVAGMS GHLVELLRAL VHDPARLVDA IPLRDAGEVP
1141 EAGPERDRPD LGGLHRVAAE AARAHPDTTA VVAPDGTLSH VALHRAATGV AAGLRALGAL
1201 PGEPVAVLHQ RGVALPIAYL GVLHAGCAVL PLDPDDPAPR RAVLLADSGT RFLLTGDDVP
1261 DDGVDLPVRR LDTAALARRP GRGRSTPVHP EQPAYLLYTS GSTGVPKGVL VPHRGIVNRL
1321 RWMQEHYGLA PGERVLHKTP VSFDVSWWEL CWPLIAGGTV VLAPPGLHRD PSGLAAFITR
1381 VAVGTAHFVP SALTPFLAES ARAGAAASPL RRVLCSGETL PSTTRDRFFQ LFDAELHNLY
1441 GPTEASVDVT AWRCSPSEDG PVPIGLPISN TSVAVLDHRL RPVPRPIEGE LFLGGVGLAT
1501 CYAADPAKTA AAFVPDPGGT GARLYRTGDR ARRRPDGALV FRGRADQQVK IGGQRVELGE
1561 VAEVLRAQPG VTDAAAVVRD ARLIGYVRGP DAPAPAELRE RLRLLVPARL VPARIVPVDV
1621 LPVTRSGKLD HHALPDPGTD PETGPERWTT RARTPSERAL ADLWATYLGR PAIDVDTDFF
1681 SLGGDSILAI AVSSAAREAG AGFTVAELMA HPTVASLAAH LDDRPDARDV EAEALAPFAL
1741 RPELAGRGGL ADAYPVSMAQ RALIAHEGDN PAYEVYATSV VVSAALEPSA LAQAVRLVLA
1801 RHPYLRSSFD LTGSAEPMQL VWHDVPRLPL EVLDLSGDPA PEERFSAWLE AERKRHFDLD
1861 HGPLARFTAH DLGPVFRLTT SSFGLDGWCT ALVLTEVLHA YREASRGATW SPPPLRTGYA
1921 DFVALERSAI SSPEDRAFWA AELRGARPST LPRWATGSTT RQPTLQQRTV LEVDDHVRDA
1981 LSALGVELGV GLKHVLLGVH LRVVSAATGA EDAVTGLETN GRPERRDGDR VVGVFNNILP
2041 LRVGVPGDAS WADLARAAYA AERRTSPHRR YPLITLNREF GAGALFDVLF VFTHFHLYRE
2101 LSAAGGPGIS GLQAPDQTYV PLTAHFNVDA ESGRLRLLLE ADPAKVPAEQ VEEFGGLFAA
2161 ALRAAARRPH EAASRWAGSV GASGDHASVP EPGREPAVHE LVEAAVHGGP DRIALVEDGK
2221 HLSYRGLWAA SARLAEALQA FPVGPDTVVG LWAERGVDYV VGLLAILRAG AAHLSIDPET
2281 PQERVAAVLA DARATLLVLP RGVPAPEGVA FGAVLRTSAA PGPGSAGGVR RPRLSGSNLA
2341 CVLATSGSTG RPKLVGVHHY GLVNYLRWCV SAYGITEGTS APVHSSPAFD LTVTSLLAPL
2401 TAGGVAHLLP GADVTNLGTA LLSGRHTLVK ITPSHLFAVA GHLAARGRAL GGLTVVVGGE
2461 RLDGGQVAAA RAVMPDALLF NEYGPTETVV GCSAHRVGAV VEGPVPIGEP ITGASAAVLD
2521 ARDGHRGELA VGGVGVTRGY LGLPGATALA FAPDPERPGA RRYRTGDLVQ RLPGGALVFR
2581 GRADRQVKLR GHRVDLGEIE QALTAHPAVT GAAVLLGNGA AGSARLIAYW SGTSQPSELR
2641 DWLRRRLPAR LVPGDLRWLA ALPLTGSGKV DHAALAARPE HRERLVDRIE LLTDEEAAWL
2701 LRMARGQADR PQEPGGRDDR A
//