LOCUS ACU37101.1 919 aa PRT BCT 24-DEC-2013 DEFINITION Actinosynnema mirum DSM 43827 transcriptional regulator, putative ATPase, winged helix family protein. ACCESSION CP001630-3127 PROTEIN_ID ACU37101.1 SOURCE Actinosynnema mirum DSM 43827 ORGANISM Actinosynnema mirum DSM 43827 Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema. REFERENCE 1 (bases 1 to 8248144) AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O., Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C., Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Actinosynnema mirum type strain (101) JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009) PUBMED 21304636 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Actinosynnema mirum DSM 43827 JOURNAL Unpublished REFERENCE 3 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082379 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Actinosynnema mirum 101, DSM 43827 Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064 GOLD Stamp ID :: Gc01024 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 8.9x Sanger; 20x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: "Blade of grass from Raritan River NJ, USA" Collection Date :: September 1976 Isolation Country :: USA Latitude :: 40.491816 Longitude :: -74.322087 Oxygen Requirement :: Aerobe Motility :: Nonmotile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 10-30C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: Nocardicin A producer Energy Source :: Chemoorganotroph ##Metadata-END## FEATURES Qualifiers source /organism="Actinosynnema mirum DSM 43827" /mol_type="genomic DNA" /strain="DSM 43827" /type_material="type strain of Actinosynnema mirum" /db_xref="taxon:446462" protein /locus_tag="Amir_3190" /inference="protein motif:PFAM:PF03704" /note="PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: sme:SMa0464 adenylate/guanylate cyclase" /transl_table=11 /db_xref="InterPro:IPR001867" /db_xref="InterPro:IPR005158" BEGIN 1 MRFQLLGPLE VVDRSRPVAL GGTKQRAALG YLLLHPNSVV PTSSLLKALW PKDMPPTGRK 61 MLQNAVAALR GVLTAAGDSP GAPALLTHTP GYLLRVDPED VDLSRFRRLV HAGRADLTAG 121 SWQRAARTLR DAIGLWRGPL LADLVEQGVD WPELAAVRNT RLAALEDCVE AEFASGRYGE 181 MIYELERWVE AEPLRERLCG QLMRALYHCG RQADALGVYR RTRARLVDEL GLDPGRELRE 241 LERAILNQEV PHRLPARRET APAARSGAAE GGGPVAAPPV AALPVGIVPQ RQAPPAPAPV 301 TPAPVALAPL PPASAPTAEL KHVSVLMVLT RFEHDVAAAP PEEVDDALSD VAAAVREEVE 361 RAGGVVTAKA ASLIVALFGS TRSGEDDATR AVRAALAVRD RLAHGPRGAG PAALGVTAAV 421 ATGHALVRRH PGRAPEVGGG VLDRCMRLLA HVSPGEVRVC EETRGASEGA IGYDGPHDPV 481 RGSWATGARQ GAGGTPAAPP LVDRDRELAL LRGLLEQVGR RSRTHLVTVL GEPGIGKSRL 541 VDEFQRVAET SSTVVVRCPR LGGGGDLAPL ADALAPRMGI GPADPVGLVA AKLAAAARGS 601 GGAGERADRL LARLRVLFGL DVPDVLPDGS FAAWRHVLED LGGADPLVLV LEDLHWAGEA 661 LLDFVDHLTA EATSSPLLVV VTARPELFDR RPAWGGGKAE ASTITLDPLA DQDVERLLTA 721 LCVRRGPASA PTDEARAAYR EVIAHIGGNP LFAVEYARVL ADAGPPSGGG GQSPPLPPLV 781 RRVVAARIDS LPADAKAVLL DAAVLGEDLC EEGVRALGGG AVPDVARALE HLERREVLRR 841 DRDAERATAY AFRSPLVRDV AYLTIPQHAR AEKHRRAADW LERVPGHDAL RLVHHGLRSG 901 GCRPVEPSPV LPQPRQHAR //