LOCUS ACU37046.1 875 aa PRT BCT 24-DEC-2013 DEFINITION Actinosynnema mirum DSM 43827 aminotransferase class-III protein. ACCESSION CP001630-3072 PROTEIN_ID ACU37046.1 SOURCE Actinosynnema mirum DSM 43827 ORGANISM Actinosynnema mirum DSM 43827 Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema. REFERENCE 1 (bases 1 to 8248144) AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O., Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C., Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Actinosynnema mirum type strain (101) JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009) PUBMED 21304636 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Actinosynnema mirum DSM 43827 JOURNAL Unpublished REFERENCE 3 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082379 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Actinosynnema mirum 101, DSM 43827 Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064 GOLD Stamp ID :: Gc01024 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 8.9x Sanger; 20x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: "Blade of grass from Raritan River NJ, USA" Collection Date :: September 1976 Isolation Country :: USA Latitude :: 40.491816 Longitude :: -74.322087 Oxygen Requirement :: Aerobe Motility :: Nonmotile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 10-30C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: Nocardicin A producer Energy Source :: Chemoorganotroph ##Metadata-END## FEATURES Qualifiers source /organism="Actinosynnema mirum DSM 43827" /mol_type="genomic DNA" /strain="DSM 43827" /type_material="type strain of Actinosynnema mirum" /db_xref="taxon:446462" protein /locus_tag="Amir_3134" /inference="protein motif:PFAM:PF00202" /note="PFAM: aminotransferase class-III; protein of unknown function RIO1; aminoglycoside phosphotransferase; ABC-1 domain protein; KEGG: sus:Acid_1674 aminotransferase" /transl_table=11 /db_xref="InterPro:IPR000687" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR002575" /db_xref="InterPro:IPR004147" /db_xref="InterPro:IPR005814" BEGIN 1 MLGHLARAVA ALALEAARHL LVPALRGRRE SGRQRRRARA ALAFLVRMGP IYIKLGQIAA 61 TRSDLLPPEW TDTLRALQDR APHMPPGPTR RALERELGGP LGEVFRDLDL RPIASASVAQ 121 VHVAHLHDGR KVAVKLVKDG VPEEIRRSLR ALGSLVRAAH LLVPRLRHLD LPHRFDEVAR 181 LLLPQADMRR EAHQQQRVRA DFAGHPHVRV PEVVPELVTT RVLVMEHVDG IPGRDAHLVE 241 LPRAQLARRL QDAVYTMLYM HGLSHGDPHP GNVLFTPTGE LVLLDYGVTA ELTEDEKWGL 301 SSFYYACTRK EWAVAVDRFT RHFVHAGPGL AARRAGYERR MAEVLRHHFD TSTDRWSTVA 361 YFADVNEVLR AHGCRYTTTF TKVELVFLSC EGFAGQIDPD IDIWANARRF TDRYSPYMSA 421 EVEERFAEDF AVRAPTSLRL RERARSTLVA PTHMDRYFFP SAFPVFVREA SGGRVRDFDG 481 NEYVDLCGGY GPHLLGYAHP DVVAAVTEGV RRGQVNGVGN LPEVELAELL VAALPGAERA 541 VLCNSGSEAV LLAIRMCRGA RGGRAKVAKF EGHYHGLSDQ GLVSSWFRFA GERDRPEPVA 601 GSHGADPAAV AGTLVLQYGD VPGLERLREH ADELACVLLE PMPTSVVALD PPFLLALRRV 661 CDEIGVPLVF DEVVSGFRVA YGGVQSVVGV RPDLTCLGKV IGGGLPCGAV VGRAGLVDVA 721 RSTRDPFQDY ERKVFAGGTL SGNSLSCAAG AAVLRRLRAD PGVYARLEAG TERLAGALRE 781 AAGRRGIACR VSARSSIFSL TFSHRPARLY RDRLTGSDFK ATIALAYYMR RHGVHLPELH 841 AFLISAAHTA EDLELVADAF AKSLDEMTAD GFFGV //