LOCUS ACU36485.1 1028 aa PRT BCT 24-DEC-2013 DEFINITION Actinosynnema mirum DSM 43827 acriflavin resistance protein protein. ACCESSION CP001630-2511 PROTEIN_ID ACU36485.1 SOURCE Actinosynnema mirum DSM 43827 ORGANISM Actinosynnema mirum DSM 43827 Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema. REFERENCE 1 (bases 1 to 8248144) AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O., Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C., Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Actinosynnema mirum type strain (101) JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009) PUBMED 21304636 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Actinosynnema mirum DSM 43827 JOURNAL Unpublished REFERENCE 3 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082379 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Actinosynnema mirum 101, DSM 43827 Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064 GOLD Stamp ID :: Gc01024 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 8.9x Sanger; 20x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: "Blade of grass from Raritan River NJ, USA" Collection Date :: September 1976 Isolation Country :: USA Latitude :: 40.491816 Longitude :: -74.322087 Oxygen Requirement :: Aerobe Motility :: Nonmotile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 10-30C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: Nocardicin A producer Energy Source :: Chemoorganotroph ##Metadata-END## FEATURES Qualifiers source /organism="Actinosynnema mirum DSM 43827" /mol_type="genomic DNA" /strain="DSM 43827" /type_material="type strain of Actinosynnema mirum" /db_xref="taxon:446462" protein /locus_tag="Amir_2548" /inference="protein motif:PFAM:PF00873" /note="PFAM: acriflavin resistance protein; KEGG: bcb:BCB4264_A5560 transporter, AcrB/AcrD/AcrF family" /transl_table=11 /db_xref="InterPro:IPR001036" BEGIN 1 MSVLARLSLA NRGLVALLSL VVLGFGVLAL PSLKQQLFPS IELPAAAVVA PYPGASPDLV 61 DSQVAEPIAA AARGVDGVEQ VLTRSAESSA TVQVMFTYGT DLNTAISQLQ QAVNRLGSRL 121 PEGVDPTIVQ GSTDDLPVIA LAATAGDDDI AMAAKLREQV VPELEAIPGV REATVSGERE 181 RQVTVTVDYA KLAAARLEPT ALSAALTSAG MTIPAGSVTD GDRSLTVQVG GPVTSIEQLR 241 AVRVNQQVTL GDVATVESAP LPATSITRTD GEPTLGISLT MGSDGNAVQI SDEVRAKLGE 301 LGSAVGSTLT VSFDQGPAVA KAISGLTTEG LLGLLFAVVV ILLFLMSLRS TLVTAVSIPL 361 SVVVALVALW VGDLSLNLLT LGALTIAIGR VVDDSIVVLE NIQRHLGYGE EKQKAVLEGT 421 REVAGAVTAS TLTTVAVFLP IAFVTGIAGE LFSPFAITVT VSLLASLLVS LTIVPVMAFW 481 FLKRPEVPTD PAEAEAARVA ALEKEERSKL QRAYVPVLRF ATKRRGVTVA ASVLIFAVTL 541 GLAGTLQTNF IGDTGGDALQ GTQELEPGAS LAARDEAAKK VEQVLADTDE VETYQVTLGG 601 GGMLAGFGMG GSSTQISATL REGSDMEAVR ERLTERLGEL DGAGEVDFSA GAAAGFSSDG 661 IEVLVTAPDA ERLKQAADAV QRELTGAPGV GEVTNDLAVS APRVQVAVRE EAARATGLSN 721 QVVGQFAMQA LRGTPAGELP IDGATQQIVL RSGVAPTDVA ALRELQLPGG VRLGQVADVS 781 VVDGPVQIRR TDGDRSATVT AKATGSDLGT VTTEVTNRVN AVELPEGAET SIGGVSADQA 841 ETFADLGLAM LAAIAIVFLI MVATFHSVVQ PLILLVSIPF AATGAIGLLL LTGTPLGLPS 901 LIGMLMLVGI VVTNAIVLID LVNQYRAAGM GVVEAVVEGG RRRLRPILMT AAATIFALLP 961 MALGITGEGA FIGKPLAIVV IGGLLSSTLL TLVLVPTLYT IVENRKERRA AKRAARRNEQ 1021 PERETASV //