LOCUS ACU35732.1 1193 aa PRT BCT 24-DEC-2013 DEFINITION Actinosynnema mirum DSM 43827 cobaltochelatase, CobN subunit protein. ACCESSION CP001630-1758 PROTEIN_ID ACU35732.1 SOURCE Actinosynnema mirum DSM 43827 ORGANISM Actinosynnema mirum DSM 43827 Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema. REFERENCE 1 (bases 1 to 8248144) AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O., Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C., Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Actinosynnema mirum type strain (101) JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009) PUBMED 21304636 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Actinosynnema mirum DSM 43827 JOURNAL Unpublished REFERENCE 3 (bases 1 to 8248144) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082379 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Actinosynnema mirum 101, DSM 43827 Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064 GOLD Stamp ID :: Gc01024 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 8.9x Sanger; 20x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: "Blade of grass from Raritan River NJ, USA" Collection Date :: September 1976 Isolation Country :: USA Latitude :: 40.491816 Longitude :: -74.322087 Oxygen Requirement :: Aerobe Motility :: Nonmotile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 10-30C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: Nocardicin A producer Energy Source :: Chemoorganotroph ##Metadata-END## FEATURES Qualifiers source /organism="Actinosynnema mirum DSM 43827" /mol_type="genomic DNA" /strain="DSM 43827" /type_material="type strain of Actinosynnema mirum" /db_xref="taxon:446462" protein /locus_tag="Amir_1784" /EC_number="6.6.1.2" /inference="protein motif:TFAM:TIGR02257" /note="KEGG: pag:PLES_21191 cobalamin biosynthetic protein CobN; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase" /transl_table=11 /db_xref="InterPro:IPR003672" /db_xref="InterPro:IPR011953" BEGIN 1 MILLLSTSDT DLLSARASGA DYRLGNPARL GVDDLPELVE GADLVVVRIL GGRRIWEEGL 61 DHLLAGPRPV VVLGGEQNPD AELMELSTVP GGVCAEAHTY LAHGGSANLA QLHAFLSDTV 121 LLTGVGFEPP VAAPNWGLLE RPEPAGDPDE GTRPTVAVLY YRAHHVAGNT AFVHSLCDAV 181 EAKGGRALPI FCSSLRTAEP ELLAELRKAD ALVVTVLAAG GTKPATASAG GDDDAWDVGA 241 LAELDVPILQ GLCLTSSRAD WDDNDDGLSP LDTATQVAIP EFDGRIITVP FSFKEIDEDG 301 LTVYVADPER ALRVAGIAVR HGKLRHTPPA DRKVVLMLSA YPTKHSRIGN AVGLDTPASA 361 VRLLAALREQ GYDLGEGFPG LDDLNGDALI HALIAAGGQD PDWLTEEQLQ GNPVRLPAAR 421 YREWYGTLPE DAREDMERHW GPAPGELFVD RSRDRDGEIV LAALRSGNVV VMVQPPRGFG 481 ENPIAIYHDP DLPPSHHYLG AYRWLEAEFG ADAVVHVGKH GNLEWLPGKT VGLSAGCGPD 541 AALGDLPLIY PFLVNDPGEG TQAKRRAHAT LVDHLVPPMA RSDSYGDIAR LEQLLDEHGN 601 IAAMDPAKLP AIRAQIWTLI QAAKLDHDLG LTDRPHDAEF DELILHVDGW LCEIKDVQIR 661 DGLHVLGEPP VGAARVNLVL AILQAPQVWA GQVAALPGLR DALGLKQGAD RLDTDAAEQR 721 ARELVQAMED ADWAPEHAAT LTDDRDVVGI LEFGAREVVP RLARTTDEMT HVLHALSGGY 781 VPAGPSGSPL RGLVNVLPTG RNFYSVDPKA VPSRLAWETG QAMADSLLER YRAETGEWPP 841 SVGLSVWGTS AMRTSGDDIA EVLALLGVRP VWDEQSRRVT GLAVVDLEEL GRPRIDVTVR 901 ISGFFRDAFP HVVALLDDAV RLVSDLDESD SDNFVRAHVR AALDEHGDDR RATMRIFGSK 961 PGAYGAGLLP LIDSRNWRDD ADLAEVYAVW GGYAYGRGLD GVQARPDMET AYKRIAVAAK 1021 NIDTREHDVI DSDDYFQYHG GMVATVRALT GKAPKAYVGD STRPDAVRTR TLHEETNRIF 1081 RARVVNPRWL AAMRRHGYKG AFELAATVDY LFGYDATTGV VADWMYEKLA EAYVFDEENQ 1141 RFLNESNPWA LHGITERLLE AADRGLWEHP EQATLDALRA VYLNTEGDLE DRR //