LOCUS ACU34870.1 1364 aa PRT BCT 24-DEC-2013
DEFINITION Actinosynnema mirum DSM 43827 methyltransferase FkbM family
protein.
ACCESSION CP001630-896
PROTEIN_ID ACU34870.1
SOURCE Actinosynnema mirum DSM 43827
ORGANISM Actinosynnema mirum DSM 43827
Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
Actinosynnema.
REFERENCE 1 (bases 1 to 8248144)
AUTHORS Land,M., Lapidus,A., Mayilraj,S., Chen,F., Copeland,A., Del
Rio,T.G., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Chertkov,O.,
Bruce,D., Goodwin,L., Pitluck,S., Rohde,M., Goker,M., Pati,A.,
Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jeffries,C.C., Brettin,T., Detter,J.C., Han,C.,
Chain,P., Tindall,B.J., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P.
TITLE Complete genome sequence of Actinosynnema mirum type strain (101)
JOURNAL Stand Genomic Sci 1 (1), 46-53 (2009)
PUBMED 21304636
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 8248144)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of Actinosynnema mirum DSM 43827
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 8248144)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C.,
Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082379
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Actinosynnema mirum 101, DSM 43827
Culture Collection ID :: DSM 43827, ATCC 29888, NBRC 14064
GOLD Stamp ID :: Gc01024
Funding Program :: DOE-GEBA 2007
Assembly Method :: Newbler version 1.1.02.15, Phrap
Sequencing Depth :: 8.9x Sanger; 20x pyrosequence
Gene Calling Method :: Prodigal
Isolation Site :: "Blade of grass from Raritan River NJ,
USA"
Collection Date :: September 1976
Isolation Country :: USA
Latitude :: 40.491816
Longitude :: -74.322087
Oxygen Requirement :: Aerobe
Motility :: Nonmotile
Sporulation :: Sporulating
Temperature Range :: Mesophile
Temperature Optimum :: 10-30C
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: Nocardicin A producer
Energy Source :: Chemoorganotroph
##Metadata-END##
FEATURES Qualifiers
source /organism="Actinosynnema mirum DSM 43827"
/mol_type="genomic DNA"
/strain="DSM 43827"
/type_material="type strain of Actinosynnema mirum"
/db_xref="taxon:446462"
protein /locus_tag="Amir_0910"
/inference="protein motif:TFAM:TIGR01444"
/note="TIGRFAM: methyltransferase FkbM family; KEGG:
pzu:PHZ_c0476 hypothetical protein"
/transl_table=11
/db_xref="InterPro:IPR006342"
BEGIN
1 MKRRPVRVVH TGHSPKLGSY TATEFPSNPE TAPVLIGCTV ATAAELPAVK ALSSSFLAHH
61 PEARFLALVV DAAPGTSGPG LVTPADLGVT AEELAVLATG CTAAELCGVL RPLLLEQLLG
121 QGVPVLCLDP WVRVLAPVTE QVLAAAEQGP LVLLPRSLRP LPDDGLRPTP TELLRTGVFD
181 PGFLVVAPGA EPFLRTLAEQ LRRTPDATKA VLDMAPALVK VHVLRDATIG LSAWNAAQRP
241 VHRLDDGALS VMGEPLRTVH FAGFDPNRPW LLSARFADRP RVLLSEHPLL ADLCTAYRAD
301 LVRAGHTAQR VPYGFGQLAD GTPIPDRLRA DYRAASRTGT PHGPFGTPRP IPVPPQELLL
361 DGAPDLADGQ PESVPPQGEP GQAGPAQAGP AQDGPVESAD APTAAVPAAS DTDAPTRAAL
421 TVVPDGGAPE AATPDGSAPE GSAPEDSAPA GQPEADVPES AASDPAASTD PTTATAAASD
481 ADDRPHTPPP AFGDDRGAAF LAWACEPVRG LHGSTRWSVA LWQGDLALRH EFPDPFGEDS
541 AAFRDWCATT GVASGRLPVP AVPGPRAGTP ALIDQLGVTV LGDDPAADLL RAAAKASGLP
601 TGDGYPVVLR VGDEPVPADR FLVDYLASDQ PPQSLDATEL WTPSEATRAA VERAGGPVVR
661 VLPLPTAEAD AGVPEPHEGL LLGALADHSI DRSGNVLGVV AAFLAAFPDR DDVRLRITVT
721 GADEHPEAAE RLRLATATDP RVELADDFRP VDCLVSLHRG GADDRVAAAL ADVAATGTPV
781 MTARHGAVPE LFDKATALFV PCRQGVEPDA DAAVKLLRAI ADEPEAVAAI GAAGREHVRA
841 TRSTAQVAEV LRERVEHAYR GWRARRAAAK PAPVADPLQV LQTAKHALLR EPDVSVASRI
901 PMAPQLRKVV LRVLDHHDNH MRDVLGGMVD GVERTVAELV RRQDEVTTGI GLGELEVLRS
961 EVEQQAERQG EHSDQLIALD DSVVRVRADM AGQGRRLRDI EDALVAEAAK RAKQGEAAAQ
1021 RIDKLAVALE RTLDRIDRLE SRVVDVLRDR DHRLDAGVRS AAQAQATADA LRRVVVREHE
1081 RHSASAPSVR SSLVLTEVGL LRLPADDAFM LPFLSSNGTW EAELSELIDS VVEPDGIFLD
1141 VGAYAGYQTV RMLSRMGTTG AVVAVEPCPS AVELLRHNVQ VNLPQRVAER LVVVPAAAWE
1201 SAGELAAQPS LTGGVSVSPL PPDAPADAPR VRATRLDKEL EAVPGLAGLK LSVVRVDAPG
1261 RGHRALAGLV RLLRRDRPHV FLEFSATATE ALGDDPVRVL AEFRVWGYDL VPVATREPAA
1321 PEAVVAAMEG LRSVPLWLRP RPVPAKGVPP QAAPTASQRA DQAI
//