LOCUS ACS93418.1 1370 aa PRT VRL 09-MAY-2013
DEFINITION Human betaherpesvirus 5 major capsid protein protein.
ACCESSION GQ221974-82
PROTEIN_ID ACS93418.1
SOURCE Human betaherpesvirus 5 (HHV-5)
ORGANISM Human betaherpesvirus 5
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota;
Herviviricetes; Herpesvirales; Orthoherpesviridae;
Betaherpesvirinae; Cytomegalovirus; Cytomegalovirus humanbeta5.
REFERENCE 1 (bases 1 to 235154)
AUTHORS Davison,A.J., Akter,P., Cunningham,C., Dolan,A., Addison,C.,
Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D. and
Wilkinson,G.W.
TITLE Homology between the human cytomegalovirus RL11 gene family and
human adenovirus E3 genes
JOURNAL J. Gen. Virol. 84 (PT 3), 657-663 (2003)
PUBMED 12604818
REFERENCE 2 (bases 1 to 235154)
AUTHORS Akter,P., Cunningham,C., McSharry,B.P., Dolan,A., Addison,C.,
Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D.,
Wilkinson,G.W. and Davison,A.J.
TITLE Two novel spliced genes in human cytomegalovirus
JOURNAL J. Gen. Virol. 84 (PT 5), 1117-1122 (2003)
PUBMED 12692276
REFERENCE 3 (bases 1 to 235154)
AUTHORS Dolan,A., Cunningham,C., Hector,R.D., Hassan-Walker,A.F., Lee,L.,
Addison,C., Dargan,D.J., McGeoch,D.J., Gatherer,D., Emery,V.C.,
Griffiths,P.D., Sinzger,C., McSharry,B.P., Wilkinson,G.W. and
Davison,A.J.
TITLE Genetic content of wild-type human cytomegalovirus
JOURNAL J. Gen. Virol. 85 (PT 5), 1301-1312 (2004)
PUBMED 15105547
REFERENCE 4 (bases 1 to 235154)
AUTHORS Griffin,C., Wang,E.C., McSharry,B.P., Rickards,C., Browne,H.,
Wilkinson,G.W. and Tomasec,P.
TITLE Characterization of a highly glycosylated form of the human
cytomegalovirus HLA class I homologue gpUL18
JOURNAL J. Gen. Virol. 86 (PT 11), 2999-3008 (2005)
PUBMED 16227221
REFERENCE 5 (bases 1 to 235154)
AUTHORS Cunningham,C., Gatherer,D., Hilfrich,B., Baluchova,K., Dargan,D.J.,
Thomson,M., Griffiths,P.D., Wilkinson,G.W., Schulz,T.F. and
Davison,A.J.
TITLE Sequences of complete human cytomegalovirus genomes from infected
cell cultures and clinical specimens
JOURNAL J. Gen. Virol. 91 (PT 3), 605-615 (2010)
PUBMED 19906940
REFERENCE 6 (bases 1 to 235154)
AUTHORS Davison,A.J.
TITLE Direct Submission
JOURNAL Submitted (28-MAY-2009) MRC Virology Unit, Church Street, Glasgow
G11 5JR, UK
COMMENT On or before Aug 17, 2009 this sequence version replaced
AY446863.1, AY446867.1, AY446875.1, AY169795.2, AY156040.1,
AY325311.1, DQ195526.1.
The original gene nomenclature has been retained. Genes presumably
inherited from the common ancestor of alpha-, beta- and
gammaherpesviruses (core genes), from the common ancestor of beta-
and gammaherpesviruses (betagamma genes), or from the common
ancestor of betaherpesviruses (beta genes) are indicated. A
standard protein nomenclature has been applied so that orthologs
have the same name in all herpesviruses.
FEATURES Qualifiers
source /organism="Human betaherpesvirus 5"
/mol_type="genomic DNA"
/strain="3157"
/isolation_source="urine from a congenitally infected
infant"
/host="Homo sapiens"
/db_xref="taxon:10359"
/country="United Kingdom"
/collection_date="2001"
/note="sequenced at passage 3 in human fibroblasts; three
genes are mutated (RL13, UL40 and UL128);
acronym: HCMV; acronym: HHV-5"
protein /gene="UL86"
/note="6 copies form hexons, 5 copies form pentons;
involved in capsid morphogenesis"
BEGIN
1 MENWSALELL PKVGIPTDFL THVKTSAGEE MFEALRIYYG DDPERYNIHF EAIFGTFCNR
61 LEWVYFLTSG LAAAAHAIKF HDLNKLTTGK MLFHVQVPRV ASGAGLPTSR QTTIMVTKYS
121 EKSPITIPFE LSAACLTYLR ETFEGTILDK ILNVEAMHTV LRALKNTADA MERGLIHSFL
181 QTLLRKAPPY FVVQTLVENA TLARQALNRI QRSNILQSFK AKMLATLFLL NRTRDRDYVL
241 KFLTRLAEAA TDSILDNPTT YTTSSGAKIS GVMVSTANVM QIIMSLLSSH ITKETVSAPA
301 TYGNFVLSPE NAVTAISYHS ILADFNSYKA HLTSGQPHLP NDSLSQAGAH SLTPLSMDVI
361 RLGEKTVIME NLRRVYKNTD TKDPLERNVD LTFFFPVGLY LPEDRGYTTV ESKVKLNDTV
421 RNALPTTAYL LNRDRAVQKI DFVDALKTLC HPVLHEPAPC LQTFTERGPP SEPAMQRLLE
481 CRFQQEPMGG AARRIPHFYR VRREVPRTVN EIKQDFVVTD FYKVGNITLY TELHPFFDFT
541 HCQENSETVA LCTPRIVIGN LPDGLAPGPF HELRTWEIME HMRLRPPPDY EETLRLFKTT
601 VTSPNYPELC YLVDVLVHGN VDAFLLIRTF VARCIVNMFH TRQLLVFAHS YALVTLIAEH
661 LADGALPPQL LFHYRNLVAV LRLVTRISAL PGLNNGQLAE EPLSAYVNAL HDHRLWPPFV
721 THLPRNMEGV QVVADRQPLN PANIEARHHG VSDVPRLGAM DADEPLFVDD YRATDDEWTL
781 QKVFYLCLMP AMTNNRACGL GLNLKTLLVD LFYRPAFLLM PAATAVSTSG TTSKESTSGV
841 TPEDSIAAQR QAVGEMLTEL VEDVATDAHT PLLQACRELF LAVQFVGEHV KVLEVRAPLD
901 HAQRQGLPDF ISRQHVLYNG CCVVTAPKTL IEYSLPVPFH RFYSNPTICA ALSDDIKRYV
961 TEFPHYHRHD GGFPLPTAFA HEYHNWLRSP FSRYSATCPN VLHSVMTLAA MLYKISPVSL
1021 VLQTKAHIHP GFALTAVRTD TFEVDMLLYS GKSCTSVIIN NPIVTKEERD ISTTYHVTQN
1081 INTVDMGLGY TSNTCVAYVN RVRTDMGVRV QDLFRVFPMN VYRHDEVDRW IRHAAGVERP
1141 QLLDTETISM LTFGSMSERN AAATVHGQKA ACELILTPVT IDVNYFKIPN NPRGRASCML
1201 AVDPYDTEAA TKAIYDHREA DAQTFAATHN PWASQAGCLS DVLYNTRHRE RLGYNSKFYS
1261 PCAQYFNTEE IIAANKTLFK TIDEYLLRAK DCIRGDTDTQ YVCVEGTEQL IENPCRLTQE
1321 ALPILSTTTL ALMETKLKGG AGAFATSETH FGNYVVGEII PLQQSMLFNS
//