LOCUS ACQ82373.1 749 aa PRT BCT 28-JAN-2014 DEFINITION Beutenbergia cavernae DSM 12333 ATP-dependent transcriptional regulator, MalT-like, LuxR family protein. ACCESSION CP001618-4107 PROTEIN_ID ACQ82373.1 SOURCE Beutenbergia cavernae DSM 12333 ORGANISM Beutenbergia cavernae DSM 12333 Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia. REFERENCE 1 (bases 1 to 4669183) AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T., Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C., Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122) JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009) PUBMED 21304633 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The draft genome of Beutenbergia cavernae DSM 12333 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082741 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333 Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC 16432 GOLD Stamp ID :: Gi02225 Greengenes ID :: 26352 Funding Program :: DOE-GEBA 2007 Isolation Site :: "Cave soil in Guangxi, China" Isolation Country :: China Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 28 C Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: L-Lysine containing ##Metadata-END## FEATURES Qualifiers source /organism="Beutenbergia cavernae DSM 12333" /mol_type="genomic DNA" /strain="DSM 12333" /type_material="type strain of Beutenbergia cavernae" /db_xref="taxon:471853" /note="type strain of Beutenbergia cavernae" protein /locus_tag="Bcav_4133" /note="PFAM: Bacterial regulatory proteins, luxR family" /transl_table=11 BEGIN 1 MGDAPGPVPA AAELDGLLLD AKLAVPARRT AAVSRADLIQ GARSSGRRVV GVTAPAGYGK 61 STMLAEWAAL EDRPVAWVSL DTLDDDPSSL LVVLASAFAR VSDGPEGLVA DMVGPDASVL 121 GRAAPRLASA LRRSPTPFVL VLDDLHELQS PACHDVLGVV VAGIPAGSQL VAASRTEQPH 181 LPRLRAAGEI VEIVASDLVL DVAGTLQVFA ASHVPVSPEA AAAVTERTEG WPVGIYLASL 241 IARHSGGDAV AVTGEDPYVA DYLQRESYRR LPEDMRTFLR RTAVLDNLCG PLCDEVTGEP 301 GSREMLRRLE ASSLFLVPLD RRRWWFRYHA LFREFLLGEL TTVEAQLVDG LRRRAADWYE 361 AHGSPERAVE QLLQTSDRER CVRLVTRLVM TLFQAGQLST VGKWLRALGD DAVVAYPPLA 421 VLAGYVAAYE GRAGEAERWG AVVDAAAFDG EMVDGSASFD SARAMYRALR CPQGPQALLD 481 DAALAVASEP EWSVWRDTAL TASGLARLLV GDVDGAAREF ERTVAAAAAV GNADTLVFCE 541 AQLAQRDMDH GQWERGRERI RHALDAIEEH RMYDYPTSAP AFAAAARLAL HDGDLAETRR 601 LLTRGMRVRT FCTYAFPTLA VRARMHLART SWAAGDVAAV RHLLREIDDV LLHRPNLGVL 661 VDEVADLRQE FGAGSRAASM ATSVPPLSPA ELRLLPYLQT HLTIREIGER LFVSRNTASS 721 EIGSIYRKLG ASSRSEAVRQ AVTMGLLGE //