LOCUS ACQ82177.1 1340 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 hypothetical protein protein.
ACCESSION CP001618-3911
PROTEIN_ID ACQ82177.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_3936"
/transl_table=11
BEGIN
1 MRNMDNDVTS QVGNAGISRR SVVAMLVGSA VLPPVLGAAP ASAAPSGPEP SADGPPADAL
61 RRLEKPDLAF REAATITGPR HRVTFHEATW TGGRTYVRDL EVRTDAGWLP VTSVEGRFDE
121 QWVVLTSEEP ADAFFYYSSA QPRWVAFDSL HQLDDRTVEL RGAHEGEFDL VVRWDLSSGR
181 PELHHVLTAG PARHYIVGYQ AVDVAPFDEV EEVLCGALQH ARAVGSPAAL ASWELFAPMA
241 LTQRTIAGTT ATLGVHVPAD VIEYEHEREL GPNGQPFGMS LRNDSADVQP VAYAPHAGRR
301 SLLAAGESRG YAFGVVAHAG SLYDAYVDVC REDLGLTAYR QNVRGTSLTQ TAHNLLDLVT
361 IDPDADDSEA FVPSFSGWWN RAKGFVDVEN DQSVRTAVAG IMLSAQYLLC APGDGGDVYA
421 RRARPMIEYH VSRRNHGTTP IVGHDVYGDA SITSWGLGGV SGDASTLVPL YQQTRGQNAG
481 LFELAMGTIA NPPFRDTRTP MSTPIQAYRI TGDEAWLAEA LARARHYART EIDVPYTRNG
541 PEGSFGFTYS KAWLELFVLH ELTGEQDLLE AAHREAKRFV TQTMARKVPG GRIRVPFGDH
601 IDDQFDDWDG HVMPDYPNDD FDDDVVPAWE VSTTGLTFEQ LTTYKSKDDL PNPGGGFVMN
661 PIWAPFLLRL AHAVGDSFIA DVAHNMVVGR FTSYPGYYYR QFVAWQLEPD FPLVGPPGLT
721 CLYFHHAPAQ MGLAIDYLFS EHEVRSDGEI SFPRELECDF VYFKYSTYGH APGRFYGEDG
781 VWPYLPAGSV SVDDPQINWL TGVGNDSLYL SLTNESTTAS RVTVSFDAEL TGIRRSGRYD
841 VEIVGGDGRR RPVRIRNGRL DVEVPGRGLA AVVIRGAGRP APWHRLPEAQ DRSASSWASD
901 DVDGTQTGIV RGMLLARPDG SGADAYVQSS STDPATLRYR VDDGAEQVIA DKPYPNEWTI
961 PLEGTTAVVR YSVETTAGVS PERTLAFPPL ITGVAPDGVG AFGQVEVSPT ASPGDTLAVT
1021 VRVRSAADEP WEDVALALGV PDGWVPTADP GNPTVLPAGG TVTWAFSVAV PQDAPVATTA
1081 ITAGLTSGAG DAVIGEASVA VVEPIRILSL TAAPETVSPG DSITLAVHVL NRGPVAQSRT
1141 ITLAANPGWT LPVTTLAFDL PARGEAEQTI TVPSSATIAP GTRSYFSARI GDGVRVQDSV
1201 LVVDPNTIQL TNNDFFPRFD RSGTWLVSGL PGPDGLNSLY SPLDVAGGTG TWRPEIAVAG
1261 QYEVAIWYPS NAETSRSAVY VVHHADGEEE FVVDQQVAPR AWNVLGTYPF AAGADGFVRI
1321 EVRTADGYTR LAGARFRLVG
//