LOCUS ACQ81632.1 1246 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 coagulation factor 5/8
type domain protein protein.
ACCESSION CP001618-3366
PROTEIN_ID ACQ81632.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_3390"
/note="PFAM: F5/8 type C domain"
/transl_table=11
BEGIN
1 MRRRIGWVAP VVAGALVVSL AGPAQAEGGF TPEIPESVTA LVRPEHPRLI ADDDRLVQIQ
61 QWVTSDPGAA AVRDELLAEA GAILELPPTE YVFSNGRSLL WAARQVKTRV WTLALAYRLT
121 DDATYAERAY EEMAAAAEFP DWNPESFLSV AEMLNGFAIG YDWLYGYLDE EQRSVVSTAM
181 IEMGLQPAMD GYEAGDGWTT ATNNWQIVCV GGIAMASLAL ADVEPELAES LLQLGLQHVG
241 PAIDEYAPDG GFPEGPMYWR YATRFLVQYV ASLESATGTD LGFSDAPGLA DTGAFSMNMN
301 GASGRSFNFA DASSSYGGPP ELYWMAGHYQ RPEYAWWADE GLGLSGNDEA ADTAAAMVWY
361 GLSERATPGM AGLDQDARYD DVGVVLSRSA WATPTALFTG FRPGNNGGSH GDLDMGTFVL
421 DAWGMRWADE LGSDSYSLPG YFGSERWTYY RKRAEGQNTL VVNPGSGPDQ SVTATGEVIA
481 QGSSPDGAFT VADLSSAYAD RGVETWQRGV AMVDGRSRVI VQDEVEASEP ADALWFMHTS
541 ADVEIAADGR SAVLTRDGRS LLARIADGPG DAVFSVMAAE PLPTSPNPEG QAANGQSKLT
601 IRVSDAASFR LAVTFDPVVD GVPVPDLPDV TALADWSVRD GGSATLADLR YDGVTVPGFS
661 ADTRSLAVET ATLGTVEAVA SDPSHAVDIQ LPDSVPGMAT ICVDDGADVC ATRYRLYLIG
721 QAQGPMTGSI VGTNPTVNAM DGNLGTFWSA NGDGQWLRAN LPAPTEVSGV RVAWSQGASR
781 IYTFDVETST DGETWSTVWQ GTSSGTTLEM EDVTFDPVTA RYVRIVSHGN SANTWMSLSE
841 LRVVTADGVW PEVSTEPVPT ALTLDAAATM SVQSAQAVTA AVVLSDGTTV EPDGTVEVSS
901 SDPGVVQVVG DLLVARSTGV ATVVAWWRAA SGQLLHASVE ITVEDPGTST LLATQDAFVR
961 DGTYADETYG SRDTLTIKGV AADDTGYERE AFIAFDLPHP EAELVSAELV LTTYVAEGRT
1021 MAVDLFSAAA GWDEHALTWN TRPAVGDRLG GFTAGETSAQ VALSVTDAVA AALDDGAVGF
1081 ALRQDVNDTQ AFGATVMAHE AGAASPTLNL TWALPQACEE PVTGDVTGPL QLSGPSACLV
1141 GADVGGPVTV APGTAFSMSG SSIDGPLFAA GAALVTVQDS TVSGPVTVSG PGATWWENVT
1201 VTGPVSLASD DTVVLIDSSI EGPLSCGPGV SALIDTTVTG PANGCG
//