LOCUS ACQ81345.1 910 aa PRT BCT 28-JAN-2014 DEFINITION Beutenbergia cavernae DSM 12333 transcriptional regulator, SARP family protein. ACCESSION CP001618-3079 PROTEIN_ID ACQ81345.1 SOURCE Beutenbergia cavernae DSM 12333 ORGANISM Beutenbergia cavernae DSM 12333 Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia. REFERENCE 1 (bases 1 to 4669183) AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T., Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C., Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122) JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009) PUBMED 21304633 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The draft genome of Beutenbergia cavernae DSM 12333 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082741 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333 Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC 16432 GOLD Stamp ID :: Gi02225 Greengenes ID :: 26352 Funding Program :: DOE-GEBA 2007 Isolation Site :: "Cave soil in Guangxi, China" Isolation Country :: China Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 28 C Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: L-Lysine containing ##Metadata-END## FEATURES Qualifiers source /organism="Beutenbergia cavernae DSM 12333" /mol_type="genomic DNA" /strain="DSM 12333" /type_material="type strain of Beutenbergia cavernae" /db_xref="taxon:471853" /note="type strain of Beutenbergia cavernae" protein /locus_tag="Bcav_3101" /note="PFAM: Transcriptional regulatory protein, C terminal; NB-ARC domain; Bacterial transcriptional activator domain" /transl_table=11 BEGIN 1 MLGPLVVTQD GEDVALPAGR SVQLVALLAV AAPDPVSADR LLEALWDDGG GTRGALQVLV 61 HRVRRRLGEG AVESVGQSYR LGAAELVAED FALRAGHARD RVDVAPREAL AELDAALRLW 121 RGEPFGELAA ASPELAAESA RLSELHVDAL EARFEAALTA GMAGELVPDL RDAVAAHPLR 181 ERLHAHLMLA LYRAGRTAAA LDAYRAARGE LVGELGLEPG PLLKDLERAI LLEDPVLAAP 241 PAPLTGPERP VRPAQLPGPD PAFTGRPEEV DLLARELRSG SSLVAVAGPG GAGKSALALE 301 VANAVADAFP GGQLYVDLRG AMPDGEPRGV EEVLERFLRA LGLPRAPSDP EEAAAELRTR 361 TALSPVLVVL DDAASLAQVR PLLPSAPSAA IVTSRPVLGL PISLLVHLDE LSDVEALEML 421 ARAAGEDRVR AEEAAARRIV DACGRLPLAL RIAGARLAAA PHRRLAVLAD RLGDERHRLD 481 ELRHGDLAVR ASIAVGLRGL DPLAPRMLAA LGVLDMPSVS PVAAARLADV PLAVARRRLD 541 DLAEARLLVT GADESVTMHE LVRFFASERA GVEFDDDERA ALVRRGYEHY LASVRAASHA 601 FTPDLPDFRM RVGPSVEPRA VLAVEFADAQ AALAWVRTEI ANLQAVVDGV ARLPDGPELV 661 AAMLAPLVRI FDAQALHGPA ARMYAPVLER DAPTSPAEAL VWADSVVVRQ HDPANDDRLD 721 AALEVLRSGG DARALATALN VRGIRGNRTG RFDRAAEAFA ESIEILTTAG HDTAAAYPRT 781 NLVDALTGLG RLDEAAAVAE ANIASSTGMP RAITRCNLAM LRAGSGRLDE AHEQFREAAR 841 ELRDSGDLHM TARCLWHDAA VLGDAGRTEE ARQTRAEAVG LAVELGLLTP AAGESALADP 901 SGAEDAFGMS //