LOCUS ACQ81027.1 4672 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 Ig domain protein group
1 domain protein protein.
ACCESSION CP001618-2761
PROTEIN_ID ACQ81027.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_2782"
/note="PFAM: Bacterial Ig-like domain (group 1)"
/transl_table=11
BEGIN
1 MWGLMRNSGA HGDRVRHAEP GRRRRGIAAA VAIGALLASG VVALQVVPAA AASHTFLVNS
61 LSHQGDDAAP GDGVCETATG LCTLRAALQE SNALPADDTV TIAPADDVDS ATPGVQPSGT
121 IVASGTGATN MMYVGTLTPW GDSGAYFMAT ATVTFDFQNR LGIASLNDAG GATAIYLNGP
181 DVAVRNFSNI KSNETAFVFG PSGDGAVVEN GSCTDPGSIN LERCFWLADG ADGVTIRNVE
241 MGSTYSGGGS AIRVAAGATI NDLTLDRIRM FDPDTEAYYG FQMQGSATLN GLTITGSTFE
301 GFQSGRYQLD LTGATLTDAT ITGNTFTRIN SAGATSIYVN RAGSGNVIER NTLSNTAAQN
361 ASYGVYFAGM GLTGTASSGW TVQDNYFDGR RSWSVFVGAG SGILPVQRNT FGPNSFGGGT
421 PANEDDTTAL VFNEGVNSNQ NIRTWFPTAV APGDQTCTLD VTVTPPTAGV VPATPVTIDV
481 YYTPTTKAEV YLGSQSGITA ATTITVPYTL GAGNIRVQTT AATGATSQYS RVLAQPEADS
541 CGPFTTVEQA ASQADPTSVR DIHFTVTLSE TVTADLLPAA VSTEGSTAPG ARVTSVTRTS
601 GSSFDVVARA DGSGLVQLSL PEGAIADDAA NPSQASTSTD NVVQYVSPLT LAPTELSVEE
661 GGATGTYTVT SSLPATAPLT IAPTVTDPAW ATLTPSPLVV PTTASSGEIV AAAVDDSIVN
721 GTRTTTITHQ VTSTDPNFDG LVLPDVALEV LDNDQPVPTD SSLTISSGTR VANGVESHAA
781 TATVRNAAGG PVGGQLVTFQ TPSAVTASAG SCVTASDGTC SVTLTTTVAA DHEIRAFLEA
841 GEIGGSPATA SFVAGPWDPA TTTITSSHAE LVADGVGSAV ITITLVDAFG NRITSSGGPA
901 LWNTTGGGTL SEQADNGDGT YTARLTAPTT VGAARVSANI GGQTTQWVQV NFIPGEASPG
961 QSTIEADPTS ITADGVSTST VTVTLVDAYG NPVTAGGDTV ELATTAGSLS DVADNGDGTY
1021 TATLTSATTA GPATVTYVLD GAAGSTTAVV EFVPGAADPA TSDIEPYPSS LTADGVSQSS
1081 VIVTLRDADG NPLATGGDVV EMTTDVGSIG AVRDNGDGTY TAVFTSPRSP GVATISYTVN
1141 GVTGTATATI TLLAGAPDAD SSLIAADPTS VVANETDTST ITVTVRDAQG TVLTEGGAAV
1201 EILTDLGTLG PVTDNLDGTY TATLTAGTTT GPATVTFTVN GATSASTATV LHTPGPADAG
1261 ASTIAAAPTS VTADGTATSR VTVTLQDAYG NPLEAGGDTV TVATDLGGLG SVLDNGDGTY
1321 TAFLTSALAG TATLTYTVNG AAGAGTATVD FVAGAADPAT STIAADPESI TADGVSTSTI
1381 TVTLLDAGGN PLTAGGDTVT IETTNGTMSD VTDNGDGTYT ATLTSTPAVG TATVSFTVNG
1441 ADAAATTDVE LVAGPPAAGP SVIEADPAMV VADGESAAIA TVTLYDANGN PVTSGGADVV
1501 IATTLGTVGE VIDNGDGTYT ASITSTTTGE AVLSFTVAGD EGGNSTAVEF VAGAADPGTS
1561 TIAADPESLT ADGASTSTIT VQLVDANGNP LSSSGGTVTM TTTAGELSAV TDNGDGTYTA
1621 TLTSSTDVET ATVSFTVAGA DATATAAVAF VAGPADPASS TITADPAQIE ADGSSTSTVT
1681 VTLLDANGNP VGASGGTVAM ATDAGTLGAV VDNGDGTYTA TLTAPTSTDP PAATITFALD
1741 GVDGTATATV AFVAGVPSTT TSTIEADPIE IIADGSSTST VTVTLLDGNG NPVTDAGDVV
1801 TIATDAGTLG AVADNGDGTY TATLTSSTSA ETATVEFAID GAGASATATV DFVAGPADPA
1861 TSTIEASPTQ ITADGASTSA ITVTLLDANG NPVGASGGTV TLATTAGALS DVTDNGDGTW
1921 TATLTSSTAV ETATVSFMVS GADADATATV EFVAGAADPE ASTIVADPAS ITADGVSTST
1981 VTVTLLDANG NPVTDAGDVV ALATTAGSLG AVTDNGDGTY TATLTSSTTA ETATVSFTVD
2041 GAAGAATAEV EFVAGAADPG TSTIVADPAS ITADGVSTST VTVTLLDANG NPVTDAGDVV
2101 ALATTAGSLG AVTDNGDGTY TATLTSGVEL DTATISFTVD GAAGTATAEV EFVAGAADPG
2161 TSTIVADPTS ITADGVSTST VTVTLLDANG NPVTDAGDVV ALATTAGSLG AVTDNGDGTY
2221 TATLTSSTTA GTATVTFSVD GAPATNSSAT VEFVAGAADP GLSTIVADPT SITADGVSTS
2281 TVTVTLLDAN GNPLTASGGE VAMAATAGSL GSVTDNGDGT YTATLTSATA AGTATLTFTL
2341 DGVDGTDTAD VEFTAGAADP TTSMIEADPT SIVADGASTS TVTVTLLDAN GNPVGASGGD
2401 VVVSTDAGTV GATTDNGDGT YTATLTSSTT AGTATLTFTL DGAGGTDTAT VELTAGAADP
2461 GTSTIEADPT SIVADGASTS TVTVTLLDAN GNPVGASGGD VVVSTDAGTV GATTDNGDGT
2521 YTATLTSSTT AGTATLTFTL EGTSGTDTAT VELTAGPPDP GLSTIAADPT SITADGTSTS
2581 TITVTLLDAN GNPVPSGGNA VVVATNLGTV GAVTDNGDGT YTATLTSATA AGTATVSFTL
2641 DGTAGTDTAE VVFVAGAPDP ATSTIAADPT SITADGVATS TVTVTAVDAN GNPVGAGGAA
2701 VVIAASAGTI SGVTDNGDGT YTAVLTSATA AGTATLTFTL DGTAGTDTAE VAFVAGAADP
2761 ATSQIAADPT SIVADGVSTS TVTVTLLDAN GNPLTSGGDA VTIATDVGTI GAVTDNGDGT
2821 YTATLTSATS AGMATLTFTV GGAAADATAS VAFVAGPADP GTSTIAADPT SITADGASTS
2881 TVTVTLLDAN GNPVGAGGAV VVVSTDTGAV SGVTDNGDGT YTATLTSATQ AGTATLSFTV
2941 DGVDADATAT VEFVAGAADP GTSTIEADPT SITADGTSTS TVTVTLLDAS GNPVGASAGT
3001 VVVATDAGTV SAVTDNGDGT YTATLTAATT AGTATLTFTL DGVDGTDTAA VDFVAGAPDP
3061 GASTIEADPT SITADGAATS TVTVTVRDAQ GNPVPGGGNA VVVTTNLGSV GTTTDNGDGT
3121 YTAILTSGTA AGTATLTFTL DGVDGADTAA VDFVAGAADP GTSTIEADPT SIVADGASTS
3181 TVTVTLLDAN GNPVGASAGT VVVATDAGTV SGVTDNGDGT YTAILTSETA AGTATLTFTL
3241 DDVDGADTAA VAFVAGAADP GTSTIEADPT SIVADGASTS TVTVTLLDAN GNPVGAGGDA
3301 VTLSSTAGTL SGVTDNGDGT YTATLTSATA AGTATVSFTV NDAEADATAA VQFVAGAADP
3361 GTSTIEADPT SIVADGASTS TVTVTLLDAN GNPVTAGGDD VVVSTDAGTV SAVTDNGDGT
3421 YSATLTSATT AGTATLTFTV NDAAADATAT VQFVAGAADP GTSTIEADPT SITADGASTS
3481 TITVTLQDSN GNPVGTGGDT VTIATDAGTL GVVTDNGDGT YTATFTSATT AGTATVSFTV
3541 NGADAPATAE VQLTAGAADP ATSTIEAAPT TIVADGTSTS AVTVTLLDAN GNPVGASGGA
3601 VVVATDAGTI SGTVDNGDGT YTATLTSATA VGTATLTFTL DGAAGADTAS VEFTADAADP
3661 ATSTIAADPT SIPADGASTS TITVTLLDAN GNPVGAGGDA VTLSSTAGTL SGVTDNGDGT
3721 YTATLTSATA AGTATVSFTV NGAGADATAE VTFTAGAADP ATSTIAADPA SIVADGVSTS
3781 TITVTLRDVN GNPVTDAGDV VALATTLGTL GAVTAGGDGT YTALLTSGTA AGTATVSFTI
3841 DGVAGESTAA VTFTAGAADP GSSTIAADPA SIVADGVSTS TVTVQLVDSN GNPLTDSGGT
3901 VVIGTDAGVL TATTDNGDGT YTATLTSSTD AGTATLTFTV NGAASSSTAS VAFTAGAPDP
3961 ATSTITADPT QITADGVSTS TVTLTLLDAN GNPVGASGGT VTMSTDAGAL GPVSDNGDGT
4021 YTAVLTSPTS TDPPAAIITF ALNGTPGTAT ATVAFVAGVP STTTSEIAAD PASITADGVS
4081 TSTVTVTLRD GNGNPVTDAG DVVTLTTTLG VLGGVTNNGD GTYTATLTSA TTVGTATVSF
4141 AIGGAGASAT AEVDFVPGPA DPGTSKIVAS PTQIVADGVS TSAVTVTLLD ANGNPVGAGG
4201 STVTMATSAG TLGTVTDNGD GTYTATLTSA TSVGTATVSF AVGGAAGAAT ASVEFVVGVP
4261 DPSTSTIAAA PATIESDGTT SSTVTVTLVD ANGNPVPGGG DDVTITTSLG TLSAVADNGD
4321 GTYTATLTAT QIGTAVLTFT VNGANGTTTA QVAVVDTTPP APPVITAPSD GASVRPDVLV
4381 EGTGEPGATV TVTDGGGTVV CTAAVDATGA WSCTPSSPLP VGETTLVAAQ TDPSDNTSEP
4441 SAPVTVTVDD TAPAPPQLDP TNGAEVTGVS EPGTTVTIRD SGGNVVCVTT ADAGGRFVCV
4501 PAERIPTGTL LSATATDEAG NTSEPGFVRV GGASVTLELS VAEAGDVQIA YGRGFLPGES
4561 VSGLLESDPV DLGTLTADEN GAVTFTVTLP ADIDPGTHRV TLTGDASGEV WAEFEVPAQV
4621 PPPGPGPAPG PGPGWPGLPG TGIGVLPSVG AVLLLLGLGA GLLGVSRRRR GA
//