LOCUS ACQ80644.1 756 aa PRT BCT 28-JAN-2014 DEFINITION Beutenbergia cavernae DSM 12333 ATP-dependent DNA helicase, RecQ family protein. ACCESSION CP001618-2378 PROTEIN_ID ACQ80644.1 SOURCE Beutenbergia cavernae DSM 12333 ORGANISM Beutenbergia cavernae DSM 12333 Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia. REFERENCE 1 (bases 1 to 4669183) AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T., Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C., Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122) JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009) PUBMED 21304633 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The draft genome of Beutenbergia cavernae DSM 12333 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082741 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333 Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC 16432 GOLD Stamp ID :: Gi02225 Greengenes ID :: 26352 Funding Program :: DOE-GEBA 2007 Isolation Site :: "Cave soil in Guangxi, China" Isolation Country :: China Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 28 C Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: L-Lysine containing ##Metadata-END## FEATURES Qualifiers source /organism="Beutenbergia cavernae DSM 12333" /mol_type="genomic DNA" /strain="DSM 12333" /type_material="type strain of Beutenbergia cavernae" /db_xref="taxon:471853" /note="type strain of Beutenbergia cavernae" protein /locus_tag="Bcav_2394" /note="PFAM: Phosphoribosyl transferase domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family" /transl_table=11 BEGIN 1 MSPDTRNVAE MDPLTQTRTA AAAAPSGDLR AEAERALRAL VGSDDAALRE DQWRAVEALV 61 AERRRALVVQ RTGWGKSAVY FVATALLRAR GSGPTLIVSP LLALMRDQVA AAGRAGIRAV 121 TVNSANVTEW DQIHAAIAAG EVDVLLCSPE RLNNPAFRDE VLPRLAADTG LVVVDEAHCV 181 SDWGHDFRPD YRRIRTLLED LPRGTPVLAT TATANARVSD DVAEQLATDG ADVLVLRGAL 241 DRDSLRLAVL PRADAATRIA WLADHLGSFS GSGIVYCLTV AMAGEVAEQL RAAGHDVAAY 301 TGQTEPAERE RLEADLAANR VRALVATSAL GMGFDKPDLA FVVHLGAPSS PIAYYQQIGR 361 AGRALDRADV VLLPGPEDRA IWDYFGSLAF PPEESVRATL AALAEAPDAT ASTARLETAV 421 DLRRSRLEMM LSVLDVDGAV QRVRGGWRAT GAAWAYDAER YERVAQARRA EQAAMEEYER 481 VSDGEPRRAQ EDRDSGSERP HREGGHGCRM AFLRAELDDP ALEPGWRCGR CDVCVGSWLA 541 PLPTGEEVEE VRARIERPGV EVLPRRQWPT GMAALGLELR GRIAEEERAE PGMALARLDG 601 LGLAARVRDA LAPRPDGQEA LQVVPADLRP AVRAVLTQWT PGVDGVVLVA SERHPALVEH 661 LARGAAGVLG VPVVGQVAAA PGTSAGRHDV NSAQRLASVV RRLELDLAPA ARAGLAGKRV 721 LLVDDLTDSG WTLTVAARLL RQAGAAAVTP FVLGMR //