LOCUS ACQ79856.1 748 aa PRT BCT 28-JAN-2014 DEFINITION Beutenbergia cavernae DSM 12333 DEAD/DEAH box helicase domain protein protein. ACCESSION CP001618-1590 PROTEIN_ID ACQ79856.1 SOURCE Beutenbergia cavernae DSM 12333 ORGANISM Beutenbergia cavernae DSM 12333 Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia. REFERENCE 1 (bases 1 to 4669183) AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T., Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C., Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122) JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009) PUBMED 21304633 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The draft genome of Beutenbergia cavernae DSM 12333 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082741 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333 Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC 16432 GOLD Stamp ID :: Gi02225 Greengenes ID :: 26352 Funding Program :: DOE-GEBA 2007 Isolation Site :: "Cave soil in Guangxi, China" Isolation Country :: China Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 28 C Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: L-Lysine containing ##Metadata-END## FEATURES Qualifiers source /organism="Beutenbergia cavernae DSM 12333" /mol_type="genomic DNA" /strain="DSM 12333" /type_material="type strain of Beutenbergia cavernae" /db_xref="taxon:471853" /note="type strain of Beutenbergia cavernae" protein /locus_tag="Bcav_1600" /note="PFAM: OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase RecG" /transl_table=11 BEGIN 1 MCHGCRRVSL VSLLVSALDE PLKRALGTRT AGALGKLGLE TVGDLLSHYP RRYAEPGRLT 61 TMSELTLGEH VTIVAQVSSV GVRRRNRGKG MIVEGVITDG VSRMSLVFFA PYAGMAHTIE 121 SQLPVGATAL FTGTVNRYQG KLQLAHPSYR AIEDPDDEAE ALVDASKPIP IYPASAAIDS 181 LKIQAAIRTV LDPLRREDVP DPVPDEVRRA QQLLGRFAAL QQVHVPVTME EAYRAQAALR 241 YEEAFVLQAA LARRRAEAAA EPATARPAAA VGLLAAFDAR LPFTLTDGQR DVGVVLADEL 301 AASVPMQRLL QGEVGSGKTV VALRAMLQVV DAGGQAALLA PTEVLAAQHA RTIAAMLGPL 361 AEGGMLTGAD GATRVALLTG SQSAAQRRQA LAEAASGAAG IVVGTHALIQ EHVQFADLGL 421 VVVDEQHRFG VEQRDALRAK GRTSPHLLVM TATPIPRTVA MTIFGDLESS TLTEIPAGRA 481 GVSTHVVPAD NAAWVARTWS RIAEEVAGGH RAFVVCPRIS DTLTEPADVV DHLADDESGP 541 ESRHSIAAVE DVVAQLRGEP ALAGVEIGML HGRLTPDVKD AAMADFSSGK VPVLVTTTVI 601 EVGVDVPEAT VMAVLDADRF GLSQLHQLRG RVGRGSDPAV CLLLTHADPE TPTGKRLAAL 661 AATTDGFELA EVDLRDRREG DVLGAAQSGR TNSLKLLRVV QDRRVIERAR TDARAVVTAD 721 PSLDDHPVLA AAIARTLAGE REEFLDRA //