LOCUS ACQ79753.1 1051 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 protein of unknown function
DUF450 protein.
ACCESSION CP001618-1487
PROTEIN_ID ACQ79753.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_1497"
/note="PFAM: Type I restriction enzyme R protein N
terminus (HSDR_N); Type III restriction enzyme, res
subunit; TIGRFAM: glutamate--cysteine
ligase/gamma-glutamylcysteine synthetase, Streptococcus
agalactiae type"
/transl_table=11
BEGIN
1 MSDSSAELAL EVEIAEYLAA HGWLYSPSGQ GYDAGLALFP DDVFAWLEAT QPAELAKVVT
61 AGSASEAKQR QQLVAALSKR LDAPMSHGGG TLNVLRRPFA HVNAHLNMCQ FRPATTLNPK
121 TTADYAAVRL RVVRQVYFSP VKGDNRAIDL VFFVNGIPVA TAELKTFFKQ HVTSAIDQYK
181 HDRNPAGQPL LGHGNRALVH FAVDDDEVWM TTRLAGPRTY FLPFNRGTLD GGAGNPPNPA
241 GPASSYLWER VLQRDAWLNI LGVLMFVRHE EHVDPISGKK SRSSTILFPR FHQWEVVTRL
301 VDAARTEGPG GRYLVQHSAG SGKTNSIAWT AHRLARLHND ANEKVFDTVL VITDRTVLDN
361 QLQAAVRQID DRKDLVVTID DTEVRRAGGS KSKALAQALT DKRLIVVVTI QTFPFVMEQL
421 AENAALRENR FAIIVDEAHT SQTGATASEV RKVLSAGGVE VPEGEEIDAE DLLNSAVEQQ
481 IADAVTQRAT PSNLSYLAFT ATPKAKTLEL FGRPDPDDPD GLPRAFHLYS MRQAIEEGFI
541 LDVLRGYQTY STAYEIERTA VEHGVDASAG FTDGDGDLVD EKAASRAIME YVRLHPSNIG
601 QKVRIVVEHF RANVAYLLDG HAKAMVVTSS RKAAVRYKLE IDAYLRTQGY ADMQALVAFS
661 GSLDDEEYLI ENASEATMNP GLASLDLAEE FKAPRYRVMI VADKFQTGFD QPLLCAMYVD
721 KRLDGIAAVQ TLSRLNRTYR APSGEVKATT FVLDFVNDPL EVQASFEPYF TEARIETRTD
781 PNLVHEVAAK LAEADIYTAD DVETFTHAWF TRAGHGALSA AIKGPKDTFA TLYASAKTRQ
841 DTAELERLEL FRKDAGTFVR LYDFMSQVID YGSTELEKLS VFLRHLVRVI AVDRLSSDVD
901 LSDVVLKRVK QIDRGRLDLG LTGDAVLSPA TGAGSGAASR DPKLIALNEI IQRINTLFAG
961 EFEPGTVEGF VRSAATEVSK DPQVVAEIEA NEIDQFRKSP TVPHKVIDAV LDVPGLMEKM
1021 TGEAIGNPAI IAAIAEAAYL LHQIQRARVL E
//