LOCUS ACQ79218.1 3802 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 PA14 domain protein protein.
ACCESSION CP001618-952
PROTEIN_ID ACQ79218.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_0957"
/note="PFAM: PA14 domain; Fibronectin type III domain"
/transl_table=11
BEGIN
1 MSARVPQQAD PGRRRRAIGA LLAAVIAIPL GIGQALPASA LTAAEIPADP AEWATAPYSP
61 LPAAEIAAPG NSLVLDFDGT EGGLPASGDV ATGFTMVQPS TADATAYVPG AISVSGGSLQ
121 IAASKGIAYL HNDPAVTNGG TRNQQDNTLG VGLDADDGRL RLATAVTVPA DANQSAQGGL
181 WFGPDDDNYV KLVVIGNAAN QRQIQLSREI SAVTATTNPN PDQRTVSVTS AALGSGPVRL
241 VLEIDPVSGT ASGWYQIGSG ALTSLGAPLQ IPASFVDGSL LDAEVPGTTS FGGVFATKRN
301 LPEATAQVFS FADFSVEAID TTPPAAPTGL LVEVGNDVDL AWTAPADGDV VGYRVYRSST
361 VPVDTQGTPI SGDTPLTEPA FTDSTTFTGS TYAYAVVAVD AAGNASEPVT SAVVAPAPPA
421 GDLVARIDFT TPTGTAADGY TADTGLPYDD TRGFGWLARS TGEPFDMSLN TRVRTNTGVT
481 SDARLASIIH LEYGDTTNPN PANGIVGEDG VWEYALEDGE YAVVVGVGDS ATGNYDSSHV
541 VRAEEQVVLG PFDGNAAREY DEAVGIVEVT DGALTLDAGD GTNTKLTHVE IYRVSAGEPE
601 APAAPTDVVG VAGDAGVELT WQGVEGATGY SVYRGETADV DVDGAPLNAE PLTELSFVDA
661 DVTPGTTYFY AVVAHGEAGL RSAPSAVAEV TVPEDEPEAP SAPAGLAAEV VDGDVVLTWD
721 EVDGATGYRV YRGAEAPVAV DGDGLTSEAL TGTTYTDTGA EWESSYAYVV VAIGAGGASA
781 PSEAVEVTLP ADPEGPQEPG ECVAGEWSRE VFAAVDLSGE AAATDCVAAV DEDWGWQRPA
841 GIDNNDDFSV RFSSTLDVAE AGTYRFTARA DDGVRVLVDG VAVIDEWHAS SGGEDYVGEV
901 SLAAGAHAVV VEYYEGGGTA SVSASYERLD VEQCAAGAWQ RTVYVGTELA GEAVVTDCVN
961 AVEEDWGWQR PAGSEHNDNF SVRYATSIDS GAGTYRFTAQ ADDAVRVLVD GVAVIDEWHD
1021 SSGDVEHVAQ VALTEGPHTV VVEYYEAGGT ASVSATVTKL AEGCVAGEWS REVFAAVDLS
1081 GEAAATDCVA AVDEDWGWQR PAGIDNNDDF SVRFSSTLDV AEAGTYRFTA RADDGVRVLV
1141 DGVAVIDEWH ASSGGEDYVG EVSLAAGAHA VVVEYYEGGG TASVSASYER LDVEQCAAGA
1201 WQRTVYVGTE LAGEAVVTDC VNAVEEDWGW QRPAGSEHND NFSVRYATSI DSGAGTYRFT
1261 AQADDAVRVL VDGVAVIDEW HDSSGDVEHV AQVALTEGPH TVVVEYYEAG GTASVSATVT
1321 KLGADTEAPA VPAEIGVAAD GETLVVTWSP SVSTDTVGYR LYRGTEPGVD VEGTPVLGAA
1381 SPADVTTYTD TDVEPGTSYY YVVTAVDAAG NTSAPSAEAV GMVPAEPDTQ APEAATELTA
1441 AGGDTEVTLG WTASTSDDVA GYRVYRGLEP AVGVQGSEPI TGVGLVAEPA YTDAGVTNGT
1501 TYFYVVTAVD LAGNESVVSN EVVAVPRVPN DTDVRVDFTA TNGVPATGYV ADWGQSYGLR
1561 SSAGQGTGLT YGWLDVDGHP LALVGNGRDR ERVGVDERLD SMIHMQYGDV DGGTGTNGVL
1621 AEGVWELAVA PGLYEVTVAV GDQAGALDVY DSQHAINVEG TAALESFVGS AGAEYDTLTT
1681 TVGVWDGRLT IDADGGFNTK LAYVDVAGVE QVPHVDTVLP ENRASDHDVN AGVSATIRIP
1741 YAGIGVDPAS LPGNVHLYEL PLGVEVPTTV GTSGGNDVIS LAPDAPLKPE TSYRFVVTAG
1801 VQDNLGEAFL PFTSVFTTGS GDVVVGDEFT PLTNIEFEKV ELPIGAGTYW ASFAFGPDGK
1861 LYGTSVGEGL YRFTVNEDGT LADKEYLGYA GMTMIGLVFD EAATADDLRL WVTTTTANFN
1921 ESGQWVSGIS LLTGPALGTR NQVFSELPRS LSDHLTNSMT YGPDGRIYFM QGSNQAAGDL
1981 DNSWGQRGEQ LLTAAVLVFD PHHPQVEAAA AGGGAISVKT AQGGTYDPYA TNAPLRIHAT
2041 GIRNAYDLVW HSNGHLYVPT NGTAGGANTP GVTANANGTF TRVAAAGIPG YASVNGQDVT
2101 AQCQRRGYTG GSVPPIANQP TQRDLLFDVE EGGYYGHPNP TRCEWVLNEG NDPASPPQSP
2161 GQGGSRYPVG TAADPNYRGI AYDFEFNKSP NGALEYSSAA FGGQLQGRLV VTRFSNNNDL
2221 IFLQPDSASG EILGAQTEVG ITGVPNSTMQ GVGGFNDPLE VVEDTRTGNL YVNQYDRSGS
2281 DQRLYLLRVP ADQRPDAVTV SASELVFSAV KNTDSAAKTV TVTNSGSEAV TLDVAAAGPN
2341 GGEFEILAGD GAVLAPGAST TVSVRFSPGS VVGQRSGELR IAAGDSLVTL GLYGLTMNGI
2401 EGGNEPPLQA VLNTVGHPVD VGWTSLADGM SPSAKGDEVL EPLFVRSGTG PVRVTPLAHY
2461 APLENIPFGW YTGDGVAADR HQVGAISSTG YQSVLPPVTA GSASSFDPGA EEFGFYYYSG
2521 VFQRYGFTED RLNSPAADAH RARVYPAVNR SGVVIPNSYV VAFEDASNGD YQDYVFLLQG
2581 LKPVTDTGSG DGAVRVDFTS AAGRLAGGYL RDYGQAYGPR SGADQGSGLT YGWKELATEN
2641 NVDLSVGGTM PGNGRDRSTT SQQDVRLATL MHMQGDDVPT FNGTPVEAFW EIALPDGEYD
2701 VTIAVGDASV NTDPESHVIN VEGERAVGPF VPTGAAGSAT HHATATVRVD LEDGFLTLDP
2761 IGGVNTKINY VDIVPVEPQG PDDPSDGAQV KVSFGPAGAP TPAGWTLETG GAFSDARGYG
2821 WLDAGTGEPV DRTVATRHRT AAVSGIAYPS DVLLQSFAFL DNASQPTYTN GVWEYEVPNG
2881 EYEVAVAVGD AAYLDSTHGV TVEGQPVVAS FVPTGSTPFQ VGVRDVVVTD GRLTVANSGT
2941 NTKIDWLSIR GDGLGEPPVT PSVSVNFQTE AAPTPTGWLA DTGGQFSEAT GYGWFVDGAP
3001 ADRSGATRYR TTPTSGIAYP TGDVSRQSLI LMQGTTLTGG PIAGVEDGTW EYAVANGTYT
3061 VTASVGDPGY LDSNHGLSAE GASVIAGFTP TGTAPFTTGT ATVTVTDGRL TLVPTGINTK
3121 LNWVRIEGAS LAAPAVEVTV NGVAVGDTYA GGSAVLDVSA TASAGTTIAS LTYAVNGGAA
3181 QAWDGPVTFE AVGTYVVEIV ATDGAGRTTT REVTLDVADI GGTLTLFNEQ ATRRPNGQVL
3241 PGLSESTVVL HRINSGTTTH TTTETGTVQL RNTGSKDLRI TSLALGGPQA AQFQIVDGPE
3301 LPLDIAPGET IDLTVQFVGA SGSKGIRTAH VLVTSSDPAS PQTTVNLRAG YMSSPEGNSE
3361 LTLPQIVSLF GWTTDVGPLV GGASLGNGSE NPGSPLNGEE IRSGQWSRMD PSQPVQARQL
3421 AAFHGCCTAT ETINVAGTSA THATPYGQSI WPLTGGGNPV QLSTSPGGNF SIAVAGQSTN
3481 NPSYMAVKTW PVRDASGAVV PGSWIVGHDY ISSPSQCGIG ATNCDFQDNV YLLTNAFPVT
3541 PNDTSAPAAP TGLAGTADAG GVDLTWEPSA AVDIAGYRVE RSTGPIGTWS LISGATPVRT
3601 TAFRDAAVPF ASTVAYRVTA VDAAGNASPV SAVANVDVSA VEGRAIRINA GGPAVTVDGV
3661 SWAADTYFVG GKTYANAQVT QIAGTTQDVL YLTERSATAN LGTFGYDIPV PDGTYEVTLH
3721 YAEIYHGATG GGAGGTGKRV FSVNLEGGGV EVANLDLNAV VAPMTAYTTT HTVTVTGGNL
3781 DIDLSASVNQ PKISAIEVVP AP
//