LOCUS ACQ79160.1 1412 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 DNA helicase protein.
ACCESSION CP001618-894
PROTEIN_ID ACQ79160.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_0899"
/transl_table=11
BEGIN
1 MTGEAGEPTE PGAGRDHEAE AATRAAAVSD AVARWREALT ALGGDSALAD IDALGDAGLD
61 LSAAHPGGIA QLFAGRPTRL SNLVREPGAL GTARRRARLV LARSDELAQR YGLAATSVAL
121 GVATWTPADP EGRAASEGEG ELAAAGSEPW RAPVLLRPVH LSVPAHGTDA EVELALSPRI
181 EINPVLARAL GGGAGRLERL VVERTQRGAL DLRALLAEVD EILATALPGV RVDERVVLGS
241 FAHPGQLLAE DLDAERLAGH DVVAALAGDD EAAAALESAL PPAADGDRDP AQERGVGDLD
301 AGQRRVLDAV AMGGHLFVDA PPGADVVGTI TAIIADAAAS GRSVLHVPGT RRAGAALAET
361 VAAVGIGELV LDLTSDADRS RVAAEAFGAR MAAPVPEVDD DAVAALRLEL GQVHRSLVAH
421 VRALHEVRSR WGVSAYDALQ ALAALTAQRP GPRTEVRLDA AILERLDAPA RKQAGEELAR
481 AGALGAFQLR RADSPWYGVR LASAEEATRA VETVNRLAAR TLPGLRRQIA AAAAQTGLAP
541 ASSLAQWREQ LTMLEGVRRA LDVFQPMVFE RSAADLVAAT APRAERAQHG APLPWRTRRR
601 LRRQAKDLLR PGRHVTDLHA ELVHVQAQRD VWRLHCPAGG WPRLPESLDA LETATQDVSD
661 AVASVEEVLA PTLPAGDGAT SLVTLPLAGL EDHLLALAAD ESVARALPER TAALARLIDV
721 GLGDLVDDLA DRRVPTSLVG AELDLAWWAS VLDVVLASDS ALANAGGEDF LALTDRWRAL
781 DRGQVASLVG PVRRATVRHL RGVMREHEEQ AQGLYALARE ARRGSGDTFD LREMARVFAP
841 VAGAVVPCWS VPPMLVPQVL EPGARVDLLV LDNVQNLPTE QAVAAIGRAR QVVVLGDSRR
901 AGGGVVDALA PLLPRLTLPT DRGEEDEHLT AFLVRHGYAE VLVPVPAPPG PSRIRLDLVD
961 GRGLAAPGAD AVESVAEEVA RVVDVVVDHA LTRPEESLAV VALNARHADR VREAVAGTVA
1021 HSPAVAEFFD AARPEPFTVV DVEAASGLRR DAVVLTLGFG KTPHGRVLHR FGAVSGPRGA
1081 SLLVEAIAAS RSRLVVVSCI APDEFDRGRL RSEGPLLLHD LLEFAALDGA LPPSTDDAPP
1141 DPLLVDLAER LWRMGLTVVP QYGPAGGVRV PLAIGHPELP GRLLLAVLTD DAEYVASPSL
1201 RTRDRHRIER LERRGWTVRM LPSTAVFMDP QGEAQRICDL VTELVRSRRT TGSVHVPVVG
1261 PPERLDDEEG PDEDVPDVAD PAQTGTSAAP ARPDLEAGLP IGAYTDDQLD ELLRWLDEGE
1321 PREDEDLLAA VRTELGIARR GGRVDAVLGA ALARLRTGER RRPTTPAAPA TPASTEPPVI
1381 PDRAWEDVDR AWGDDDADDD DRLRRERPPH WG
//