LOCUS ACQ78887.1 803 aa PRT BCT 28-JAN-2014 DEFINITION Beutenbergia cavernae DSM 12333 DEAD/DEAH box helicase domain protein protein. ACCESSION CP001618-621 PROTEIN_ID ACQ78887.1 SOURCE Beutenbergia cavernae DSM 12333 ORGANISM Beutenbergia cavernae DSM 12333 Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia. REFERENCE 1 (bases 1 to 4669183) AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T., Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C., Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122) JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009) PUBMED 21304633 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The draft genome of Beutenbergia cavernae DSM 12333 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4669183) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082741 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333 Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC 16432 GOLD Stamp ID :: Gi02225 Greengenes ID :: 26352 Funding Program :: DOE-GEBA 2007 Isolation Site :: "Cave soil in Guangxi, China" Isolation Country :: China Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 28 C Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Phenotypes :: L-Lysine containing ##Metadata-END## FEATURES Qualifiers source /organism="Beutenbergia cavernae DSM 12333" /mol_type="genomic DNA" /strain="DSM 12333" /type_material="type strain of Beutenbergia cavernae" /db_xref="taxon:471853" /note="type strain of Beutenbergia cavernae" protein /locus_tag="Bcav_0625" /note="PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Domain of unknown function (DUF1998)" /transl_table=11 BEGIN 1 MTRPDTLSVL LTSAARRTSL VHLEEREPRP GSTAAWPDWA DAELVTAYVR LGVERPWVHQ 61 VEAADAAWSG THTVLATSTG SGKSLAAWLP ALTAVRRPPE QPGRISSLRR RAAVLYLAPT 121 KALAADQRHG LERLLAAGEL RDVRVATCDG DTPLDERDWA RDHADVVLSN PDFLHFSMLP 181 GHRRWDRLLR GLRYVVVDEC HAYRGVFGAH VSLVLRRLLR LAEAAGAAPT VVMASATTGD 241 PGATAARLIG VAPDRVHAVT RDASPQGRRR IALWEPPPTR ETGAAPAPVS VEEGGDAADA 301 GVLEGDFPRR SALAETADLL ADLVRGRRRT LAFVRSRIGA EVVATEALDH LGDAVAGARR 361 PPVAAYRGGY LPEERRDLEA DLRTGDLLAL ATTNALELGV DVAGLDAVLM AGWPGTRVSF 421 WQQSGRAGRA GAEGLAVLVA SENPLDTYLV HHPEAIFDEQ VEATSFDPTN PYVLAPHLCA 481 AAAERPLTDV DLERFGLPDA SLLDELERRA LLRRRPTGWY WNHALVDPPS RLTDLRGSGG 541 QAPVQVVEDG TGRLLGTVDG SRADATVHAG AVYVHQGRTF EVLGLADDVA LVTAQHVTYR 601 TRSRSTTHVR VAAELRTTSW GPVTWGYGQL EVSSQVLGYD RRRLPGMEII GSYPLELPVR 661 TFATTGVWWT APLDALREAG LDVGDVPGAL HAAEHAAIGM LPLLATCDRW DIGGLSTALH 721 EDTGQPTVFV YDGYPGGAGF AERGYGIADR WISATADAIA ACACVTGCPR CVFSPKCGNG 781 NSPIDKAGAL RVLDYLRARA AGA //