LOCUS ACQ78720.1 866 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 protein of unknown function
DUF214 protein.
ACCESSION CP001618-454
PROTEIN_ID ACQ78720.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_0457"
/note="PFAM: Predicted permease"
/transl_table=11
BEGIN
1 MRRVAWREVR EHLGRFGLSV LAVLLGVAFV TGTFSLRAML SATFSSIVQS TIQGDAYLRG
61 PAVADSDDAG GFDPADGPPE GGSSGAMFGG GGRALVPLTL ADDAAAIDGV AQAVPDVSGP
121 LVLVGADGEA VINGQAPSIG VALADDDPGV TIVEGRAPRA ADEVALETGA LAASGLAVGD
181 ATQVVLGDSV REVTVVGEAS LGTPAAGATL TFLDLDTATA AYAPEGLVGS VAIYAEDGVA
241 LDDLLAALEP LATDDVEVAS GDELREEANA QVQSILGFLG TFLLVFAGIS LFVGAFIVAN
301 AFAMSVRQRQ RDFALLRALG ASPGQVFGVV LVQAAVVGLV GSAVGAVAGY GLVHVVRAGL
361 RSVFGLTLSG EIPLSAATIA ACVVAGTLVS VVAAAIPARR AALTAPVEAM RDDVVVTERS
421 LLLRAIVGTV LLVLGAAGVV AAVRDADAAL PGGRGLWLGV GAGAALLGTI AIAPVIARAC
481 ARVLALPFLP IKPLGALARG NVTRNPRRTA STASALLIGM ALVAACAVIA ASAQASTRSI
541 VTTEVAADLM VRSATGVVPA DAVAAVEGVP GVGTADAVRF GEGRTEGPEG GSETATLGGI
601 DAEGVQRAFT LDVRSGSLDA LADGEVAVQQ RVAVEQGWAV GDSIELTGDG GARLTTSIGA
661 VIDSQVVAVD VLLADEQFDE IMRQPQVAAV LVDAAPGTSV ADLGDALDTA LEPFVVVSAL
721 DADELTSLLG DMVDQALAIL YALLALSVII AVLGIVNTLA LSVVERTREI GLLRAVGLGR
781 LQLGATITIE SILIAVFGTF VGVAVGVALA AALPSVYADQ GLSVLAVPWD RIGLILALAV
841 VVGLVAAVGP AVRASRLPVL EAISTE
//