LOCUS ACQ78628.1 1577 aa PRT BCT 28-JAN-2014
DEFINITION Beutenbergia cavernae DSM 12333 5'-Nucleotidase domain
protein protein.
ACCESSION CP001618-362
PROTEIN_ID ACQ78628.1
SOURCE Beutenbergia cavernae DSM 12333
ORGANISM Beutenbergia cavernae DSM 12333
Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae;
Beutenbergia.
REFERENCE 1 (bases 1 to 4669183)
AUTHORS Land,M., Pukall,R., Abt,B., Goker,M., Rohde,M., Glavina Del Rio,T.,
Tice,H., Copeland,A., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Hauser,L.,
Chang,Y.J., Jefferies,C.C., Saunders,E., Brettin,T., Detter,J.C.,
Han,C., Chain,P., Bristow,J., Eisen,J.A., Markowitz,V.,
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of Beutenbergia cavernae type strain (HKI
0122)
JOURNAL Stand Genomic Sci 1 (1), 21-28 (2009)
PUBMED 21304633
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Beutenbergia cavernae DSM 12333
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4669183)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ovchinnikova,G., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4082741
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Beutenbergia cavernae HKI 0122, DSM 12333
Culture Collection ID :: DSM 12333, ATCC BAA-8, IFO 16432, NBRC
16432
GOLD Stamp ID :: Gi02225
Greengenes ID :: 26352
Funding Program :: DOE-GEBA 2007
Isolation Site :: "Cave soil in Guangxi, China"
Isolation Country :: China
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 28 C
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: L-Lysine containing
##Metadata-END##
FEATURES Qualifiers
source /organism="Beutenbergia cavernae DSM 12333"
/mol_type="genomic DNA"
/strain="DSM 12333"
/type_material="type strain of Beutenbergia cavernae"
/db_xref="taxon:471853"
/note="type strain of Beutenbergia cavernae"
protein /locus_tag="Bcav_0364"
/note="PFAM: Endonuclease/Exonuclease/phosphatase family;
5'-nucleotidase, C-terminal domain; Calcineurin-like
phosphoesterase"
/transl_table=11
BEGIN
1 MGSAVRTRVT GGIGALALAV VGIGAAPLAA QAAVSPDAPV VVAEVYGGGG NSGAVYSHDF
61 IELANTSDAV VDLAGWSVQY ASAAGTNWSG VIPLAGSIEP GARYLVQAGT NNAGVGQPLP
121 APDATGSANL SATNGNIALV SAGGALQCDA AACAADAAVV DLVGFGTGAA FAGTGPAPSP
181 SNSTSIARDA DLTNTAANAA DFTVGAPTPD AAGGGDPDPD PVTATIAEIQ GDGAASPLVG
241 STVVTRGVVT AAYPTGGFDG YVIQTPGTGG VLDLATHTTS QAVFVYSAAT VGQVAIGDHV
301 EVTGVVSEFF GLTEITVGAD GLSVLSEPAD DVAPAQLAGW PADGAQRESL ESMLYLPEGA
361 FTVSDTYNTN RWGEVTLAAG EEPLRQPTDV ARPGSPEAAA VVADNAAREV RLDDGATTDF
421 LEPANSGLTP PYISLTDPVR VGAAATFGAA VVVDFRNDVW KLNPVAHVTP ADPGAYPATF
481 ANTRTDAPDA AAIGDTGDDA VRLASFNVLN YFTTLGTDGA TCVPYTDRAG DGVTVEEGCD
541 QRGAWDAEDF QRQQDKIVAA INGLDADVVG LMEIENSAAL GETADEALGA LVAALNAAAG
601 ADVWAFVPSS AELPPVELQD VITNAIIYRP GAVTPVGEPR ALGTQSAEGQ PFANAREPIG
661 QVFAPAGGGE DVFVVVNHFK SKGSPGPLPG DEDSGDGQGA SNASRVAQAT ALRDWVGQVA
721 AADDAVALLG DFNSYGQEDP LHVLYDAGYT DVEAHFDVDG SSYSFGRQSG SLDHVLLNAP
781 ALARATGADI WEINSGEAVA LEYSRHNYHG TLFYDATAYR SSDHDPVLVG LAAGDSEPTG
841 PVDLTLLNIN DFHGRIDGNT VAFAGTVEEQ RAAAEAAGGS AVFLSAGDNI GASLFASSVQ
901 QDQPTIDVLN ALELAASAVG NHEFDAGYAD LVDRVIAGGS NAQWGYLGAN VYEAGTTTPA
961 LDEYRLVESG GVTVGVIGAV TEETPTLVRP GGISTLEFGN PVEAVNRVAA QLTDGDEANG
1021 EADVIVAEYH EGAGAGTPDG STLEEEVAAG GAFAQIVNET SPLVDAIFTG HTHKQYAWDA
1081 PIPGSTETRP IVQTGSYGEF IGQVVLTYDA TTDDVTAYTA ENVARTATPA DQLIATYPRV
1141 SEVNDIVTAA LAYAEEIGEQ PVGSVAADIT TAFSGGSYVN GVYVGPGPEP TSGRDDRASE
1201 SSLGGLVANA LLDTLADADL GGAEIGVVNP GGMRAELLYA PDGVVTYAEA NAVLPFVNNL
1261 WTTTLTGEQV KLMLEQQWQR TDEGEVPSRP YLQLGLSSNV TYTFDASRPE GDRITSITVN
1321 GAPLDPAAPY RIGTFSFLAE GGDNFHVFAD GADTRDSGLI DRDAWIAYLE AHPGLEPDFA
1381 RQAVSVPELP ETEAGAEVAF DVTGLNLTSL GSPENTALTA SFDGAELGEF AVADGAASVA
1441 LTVPADATAG AHTLTLVAAP SGTTVTVPIT VSEAAPPTVG SETSLWLSQT TYRSGSWLPI
1501 IAFSHVELDD GRFPRGRVEI REGDQVVASA RVVLGVAITT LPRHLTPGTH TYTAHFVPSD
1561 PEAVSGSVSD PVTVRVR
//