LOCUS ACF56596.1 1225 aa PRT BCT 30-JAN-2014 DEFINITION Streptococcus pneumoniae G54 DNA-directed RNA polymerase, beta' subunit protein. ACCESSION CP001015-1822 PROTEIN_ID ACF56596.1 SOURCE Streptococcus pneumoniae G54 ORGANISM Streptococcus pneumoniae G54 Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus. REFERENCE 1 (bases 1 to 2078953) AUTHORS Dopazo,J., Mendoza,A., Herrero,J., Caldara,F., Humbert,Y., Friedli,L., Guerrier,M., Grand-Schenk,E., Gandin,C., de Francesco,M., Polissi,A., Buell,G., Feger,G., Garcia,E., Peitsch,M. and Garcia-Bustos,J.F. TITLE Annotated draft genomic sequence from a Streptococcus pneumoniae type 19F clinical isolate JOURNAL Microb. Drug Resist. 7 (2), 99-125 (2001) PUBMED 11442348 REFERENCE 2 (bases 1 to 2078953) AUTHORS Mulas,L., Trappetti,C., Hakenbeck,R., Iannelli,F., Pozzi,G., Davidsen,T.M., Tettelin,H. and Oggioni,M. TITLE Pneumococcal beta glucoside metabolism investigated by whole genome comparison JOURNAL Unpublished REFERENCE 3 (bases 1 to 2078953) AUTHORS Mulas,L., Trappetti,C., Iannelli,F., Pozzi,G., Davidsen,T.M., Tettelin,H. and Oggioni,M. TITLE Direct Submission JOURNAL Submitted (06-MAR-2008) J. Craig Venter Institute, 9712 Medical Center Dr, Rockville, MD 20850, USA COMMENT On or before Jul 28, 2008 this sequence version replaced AL449923.1, AL449924.1, AL449925.1, AL449926.1, AL449927.1, AL449928.1, AL449929.1, AL449930.1, AL449931.1, AL449932.1, AL449933.1, AL449934.1, AL449935.1, AL449936.1, AL449937.1, AL449938.1, AL449939.1, AL449940.1, AL449941.1, AL449942.1, AL449943.1, AL449944.1, AL449945.1, AL449946.1, AL449947.1, AL449948.1, AL449949.1, AL449950.1, AL449951.1, AL449952.1, AL449953.1. CP001015 is derived from contigs that were subjected to intra and inter-contig reassembly. All gaps confirmed by PCR and closed by sequencing. No resequencing of ambiguities throughout the genome was performed. FEATURES Qualifiers source /organism="Streptococcus pneumoniae G54" /mol_type="genomic DNA" /strain="G54" /serotype="19F" /isolation_source="respiratory sample" /db_xref="taxon:512566" /country="Italy: Genova" /collection_date="1991" /collected_by="G. Shito" /note="resistant to macrolides and tetracylcine" protein /gene="rpoC" /locus_tag="SPG_1861" /EC_number="2.7.7.6" /note="identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386" /transl_table=11 BEGIN 1 MVDVNRFKSM QITLASPSKV RSWSYGEVKK PETINYRTLK PEREGLFDEV IFGPTKDWEC 61 ACGKYKRIRY RGIVCDRCGV EVTRTKVRRE RMGHIELKAP VSHIWYFKGI PSRMGLTLDM 121 SPRALEEVIY FAAYVVIDPK DTPLEHKSIM TEREYRERLR EYGYGSFVAK MGAEAIQDLL 181 KQVDLEKEIA ELKEELKTAT GQKRVKAIRR LDVLDAFYKS GNKPEWMILN ILPVIPPDLR 241 PMLQLDGGRF ASSDLNDLYR RVINRNNRLA RLLELNAPGI IVQNEKRMLQ EAVDALIDNG 301 RRGRPITGPG SRPLKSLSHM LKGKQGRFRQ NLLGKRVDFS GRSVIAVGPT LKMYQCGVPR 361 EMAIELFKPF VMREIVARDI VQNVKAAKRL VERGDERIWD ILEEVIKEHP VLLNRAPTLH 421 RLGIQAFEPV LIDGKALRLH PLVCEAYNAD FDGDQMAIHV PLSEEAQAEA RILMLAAEHI 481 LNPKDGKPVV TPSQDMVLGN YYLTMEEAGR EGEGMVFKDR DEAVMAYRNG YVHLHSRVGI 541 ATDSLNKPWT EEQRHKVLLT TVGKILFNDI MPEGLPYLQE PNNANLTEGV PAKYFLPLGG 601 DIKEAISNLE LNPPFKKKNL GNIIAEIFKR FRTTETSALL DRMKNLGYHH STLAGLTVGI 661 ADIPVVDDKT EIIEESHKRV EQITKQFRRG MITDDERYNA VTAEWRAARE KLEKRLIANQ 721 DPKNPIVMMM DSGARGNISN FSQLAGMRGL MAAPNGRIME LPILSNFREG LSVLEMFFST 781 HGARKGMTDT ALKTADSGYL TRRLVDVAQD VIIREDDCGT DRGLLIRSIA EGKEMIESLE 841 ERLNGRYTKK TVKHPETGAV IIGPNELITE DKAREIVNAG VEEVTIRSVF TCNTRHGVCR 901 HCYGINLATG DAVEVGEAVG TIAAQSIGEP GTQLTMRTFH TGGVASNTDI TQGLPRVQEI 961 FEARNPKGEA VITEVKGQVT AIEEDASTRT KKVFVKGETG EGEYVVPFTA RMRVEVGGQV 1021 ARGAALTEGS IQPKRLLAVR DVLSVETYLL GEVQKVYRSQ GVEIGDKHIE VMVRQMIRKV 1081 RVMDPGDTDL LMGTLMDIND FTDANKDVLI AGGVPATGRP VLMGITKASL ETNSFLSAAS 1141 FQETTRVLTD AAIRGKKDHL LGLKENVIIG KIIPAGTGMA RYRNLEPHAV NEEEYLNPTV 1201 EEEGNEETTE VVVDTAVETV EETVE //