LOCUS       ACF55220.1              1169 aa    PRT              BCT 30-JAN-2014
DEFINITION  Streptococcus pneumoniae G54 transcription-repair coupling
            factor protein.
ACCESSION   CP001015-6
PROTEIN_ID  ACF55220.1
SOURCE      Streptococcus pneumoniae G54
  ORGANISM  Streptococcus pneumoniae G54
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2078953)
  AUTHORS   Dopazo,J., Mendoza,A., Herrero,J., Caldara,F., Humbert,Y.,
            Friedli,L., Guerrier,M., Grand-Schenk,E., Gandin,C., de
            Francesco,M., Polissi,A., Buell,G., Feger,G., Garcia,E., Peitsch,M.
            and Garcia-Bustos,J.F.
  TITLE     Annotated draft genomic sequence from a Streptococcus pneumoniae
            type 19F clinical isolate
  JOURNAL   Microb. Drug Resist. 7 (2), 99-125 (2001)
   PUBMED   11442348
REFERENCE   2  (bases 1 to 2078953)
  AUTHORS   Mulas,L., Trappetti,C., Hakenbeck,R., Iannelli,F., Pozzi,G.,
            Davidsen,T.M., Tettelin,H. and Oggioni,M.
  TITLE     Pneumococcal beta glucoside metabolism investigated by whole genome
            comparison
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 2078953)
  AUTHORS   Mulas,L., Trappetti,C., Iannelli,F., Pozzi,G., Davidsen,T.M.,
            Tettelin,H. and Oggioni,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2008) J. Craig Venter Institute, 9712 Medical
            Center Dr, Rockville, MD 20850, USA
COMMENT     On or before Jul 28, 2008 this sequence version replaced
            AL449923.1, AL449924.1, AL449925.1, AL449926.1, AL449927.1,
            AL449928.1, AL449929.1, AL449930.1, AL449931.1, AL449932.1,
            AL449933.1, AL449934.1, AL449935.1, AL449936.1, AL449937.1,
            AL449938.1, AL449939.1, AL449940.1, AL449941.1, AL449942.1,
            AL449943.1, AL449944.1, AL449945.1, AL449946.1, AL449947.1,
            AL449948.1, AL449949.1, AL449950.1, AL449951.1, AL449952.1,
            AL449953.1.
            CP001015 is derived from contigs that were subjected to intra and
            inter-contig reassembly. All gaps confirmed by PCR and closed by
            sequencing. No resequencing of ambiguities throughout the genome
            was performed.
FEATURES             Qualifiers
     source          /organism="Streptococcus pneumoniae G54"
                     /mol_type="genomic DNA"
                     /strain="G54"
                     /serotype="19F"
                     /isolation_source="respiratory sample"
                     /db_xref="taxon:512566"
                     /country="Italy: Genova"
                     /collection_date="1991"
                     /collected_by="G. Shito"
                     /note="resistant to macrolides and tetracylcine"
     protein         /gene="mfd"
                     /locus_tag="SPG_0006"
                     /EC_number="3.6.1.-"
                     /note="identified by match to protein family HMM PF00270;
                     match to protein family HMM PF00271; match to protein
                     family HMM PF02559; match to protein family HMM PF03461;
                     match to protein family HMM PF04851; match to protein
                     family HMM TIGR00580"
                     /transl_table=11
BEGIN
        1 MVTLLDLFSE NDQIKKWHQN LTDKKRQLIL GLSTSTKALA IASSLEKEDR IVLLTSTYGE
       61 AEGLVSDLIS ILGEELVYPF LVDDAPMVEF LMSSQEKIIS RVEALRFLTD SSKKGILVCN
      121 IAASRLILPS PNAFKDSIVK ISVGEEYDQH AFIHQLKENG YRKVTQVQTQ GEFSLRGDIL
      181 DIFEMSQLEP CRIEFFGDEI DGIRSFEVET QLSKENKIEL TIFPASDMLL REKDYQRGQS
      241 ALEKQISKTL SPILKSYLEE ILSSFHQKQS HADSRKFLSL CYDKTWTVFD YIEKDTPIFF
      301 DDYQKLMNQY EVFERELAQY FTEELQNSKA FSDMQYFSDI EQIYKKQSPV TFFSNLQKGL
      361 GNLKFDKIYQ FNQYPMQEFF NQFSFLKEEI ERYKKMDYTI ILQSSNSMGS KTLEDMLEEY
      421 QIKLDSRDKT SICKESVNLI EGNLRHGFHF VDEKILLITE HEIFQKKLKR RFRRQHVSNA
      481 ERLKDYNELE KGDYVVHHIH GIGQYLGIET IEIKGIHRDY VSVQYQNGDQ ISIPVEQIHL
      541 LSKYISSDGK APKLNKLNDG HFKKAKQKVK NQVEDIADDL IKLYSERSQL KGFAFSADDD
      601 DQDAFDDAFP YVETDDQLRS IEEIKRDMQA SQPMDRLLVG DVGFGKTEVA MRAAFKAVND
      661 HKQVVILVPT TVLAQQHYTN FKERFQNFAV NVDVLSRFRS KKEQTATLEK LKNGQVDILI
      721 GTHRVLSKDV VFADLGLMII DEEQRFGVKH KETLKELKKQ VDVLTLTATP IPRTLHMSML
      781 GIRDLSVIET PPTNRYPVQT YVLEKNDSVI RDAVLREMER GGQVYYLYNK VDTIVQKVSE
      841 LQELIPEASI GYVHGRMSEV QLENTLLDFI EGQYDILVTT TIIETGVDIP NANTLFIENA
      901 DHMGLSTLYQ LRGRVGRSNR IAYAYLMYRP EKSISEVSEK RLEAIKGFTE LGSGFKIAMR
      961 DLSIRGAGNL LGKSQSGFID SVGFELYSQL LEEAIAKRNG NANANTRTKG NAELVLQIDA
     1021 YLPDTYISDQ RHKIEIYKKI RQIDNRVNYE ELQEELIDRF GEYPDVVAYL LEIGLVKSYL
     1081 DKVFVQRVER KDNKITIQFE KVTQRLFLAQ DYFKALSVTN LKAGIAENKG LMELVFDVQN
     1141 KKDYEILEGL LIFGESLLEI KESKEENSI
//