LOCUS       ABX21881.1               430 aa    PRT              BCT 09-NOV-2020
DEFINITION  Salmonella enterica subsp. arizonae serovar 62:z4,z23:
            - hypothetical protein protein.
ACCESSION   CP000880-1927
PROTEIN_ID  ABX21881.1
SOURCE      Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
  ORGANISM  Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4600800)
  AUTHORS   McClelland,M., Sanderson,E.K., Porwollik,S., Spieth,J.,
            Clifton,W.S., Fulton,R., Chunyan,W., Wollam,A., Shah,N., Pepin,K.,
            Bhonagiri,V., Nash,W., Johnson,M., Thiruvilangam,P. and Wilson,R.
  CONSRTM   The Salmonella enterica serovar Arizonae Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-NOV-2007) Genetics, Genome Sequencing Center, 4444
            Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT     Salmonella enterica subspecies IIIa (Arizonae) serovar
            62:z4,z23:--Most bacteria in the species S. enterica belong to one
            of seven subspecies; all but subspecies I normally grow only in
            cold-blooded animals. Subspecies IIIa (S. Arizonae) is naturally
            found in reptiles, but also causes outbreaks of salmonellosis in
            turkeys and sheep and can occasionally produce both gastroenteritis
            and serious disseminated disease in humans. Many human infections
            can be traced to contact with reptiles or ingestion of various
            reptile products, particularly from rattlesnakes. Fewer than ten
            cases in humans are typically reported in the US each year.
            
            The strain of S. Arizonae (62:z4,z23:-) being sequenced is
            CDC346-86; it was named RSK2980 by R.K. Selander and is strain
            SARC5 of the Salmonella Reference C set. This serovar is of
            interest because of its taxonomic position. It appears to be the
            most divergent subspecies among the S. enterica. It can be obtained
            from the American Type Culture Collection as ATCC BAA-731, or the
            Salmonella Genetic Stock Centre as SGSC4693. The genome was
            sequenced to 8X coverage, using plasmid and fosmid libraries and
            was finished to an error rate of less than 1 per 10,000 bases.
            Automated annotation was performed and manual annotation will
            continue in the labs of Michael McClelland and Kenneth Sanderson.
            The National Institute of Allergy and Infectious Diseases (NIAID),
            National Institutes of Health (NIH) has funded this project.
            
            Coding sequences below are predicted using GeneMark v3.3 and
            Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and
            Glimmer2 were blasted against NCBI's non-redundant (NR) database
            and predictions generated based on protein alignments. RNA genes
            were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence
            was finished as follows unless otherwise noted: all regions were
            double stranded, sequenced with an alternate chemistries or covered
            by high quality data(i.e., phred quality >=30);an attempt was made
            to resolve all sequencing problems, such as compressions and
            repeats; all regions were covered by sequence from more than one
            m13 subclone.
FEATURES             Qualifiers
     source          /organism="Salmonella enterica subsp. arizonae serovar
                     62:z4,z23:-"
                     /mol_type="genomic DNA"
                     /strain="RSK2980"
                     /serovar="62:z4,z23:-"
                     /sub_species="arizonae"
                     /culture_collection="ATCC:BAA-731"
                     /db_xref="taxon:41514"
     protein         /locus_tag="SARI_02001"
                     /inference="protein motif:FPrintScan:IPR002317"
                     /inference="protein motif:HMMPanther:IPR002317"
                     /inference="protein motif:HMMPfam:IPR002314"
                     /inference="protein motif:HMMPfam:IPR002317"
                     /inference="protein motif:HMMTigr:IPR002317"
                     /inference="protein motif:superfamily:IPR010978"
                     /inference="similar to AA sequence:INSD:AAX64823.1"
                     /note="KEGG: sec:SC0917 2.3e-228 serS; serine tRNA
                     synthetase; also charges selenocystein tRNA with serine
                     K01875; COG: COG0172 Seryl-tRNA synthetase; Psort
                     location: Cytoplasmic, score:10.00"
                     /transl_table=11
                     /db_xref="InterPro:IPR002314"
                     /db_xref="InterPro:IPR002317"
                     /db_xref="InterPro:IPR010978"
BEGIN
        1 MLDPNLLRNE PDAVAEKLAR RGFKLDVDKL RALEERRKVL QVNTENLQAE RNSRSKSIGQ
       61 AKARGEDIEP LRREVNKLGE ELDAAKAELE ALLAEIRDIA LTIPNLPADE VPVGKDENDN
      121 VEVSRWGTPR EFDFEIRDHV TLGEMHSGLD FAAAVKLTGS RFVVMRGQIA RMHRALSQFM
      181 LDLHTEQHGY SENYVPYLVN HDTLYGTGQL PKFAGDLFHT RPLEEEADSS NYALIPTAEV
      241 PLTNLVRDEI IDEDQLPIKM TAHTPCFRSE AGSYGRDTRG LIRMHQFDKV EMVQIVRPED
      301 SMAALEEMTG HAEKVLQLLG LPYRKIILCT GDMGFGACKT YDLEVWVPAQ NTYREISSCS
      361 NIWDFQARRM QARCRSKSDK KTRLVHTLNG SGLAVGRTLV AVMENYQQAD GRIEVPEVLR
      421 PYMNGLEYIG
//