LOCUS       ABV12441.1              1247 aa    PRT              BCT 31-JAN-2014
DEFINITION  Citrobacter koseri ATCC BAA-895 hypothetical protein protein.
ACCESSION   CP000822-1262
PROTEIN_ID  ABV12441.1
SOURCE      Citrobacter koseri ATCC BAA-895
  ORGANISM  Citrobacter koseri ATCC BAA-895
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 4720462)
  AUTHORS   McClelland,M., Sanderson,E.K., Porwollik,S., Spieth,J.,
            Clifton,W.S., Latreille,P., Courtney,L., Wang,C., Pepin,K.,
            Bhonagiri,V., Nash,W., Johnson,M., Thiruvilangam,P. and Wilson,R.
  CONSRTM   The Citrobacter koseri Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-AUG-2007) Genetics, Genome Sequencing Center, 4444
            Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT     Citrobacter (diversus) koseri--Citrobacter cells are isolated from
            water, sewage, soils, and food, as well as from the feces of man
            and other animals, where they may be normal inhabitants. They can
            be found in urine, sputum, and other clinical specimens. They can
            sometimes be opportunistic pathogens particularly in
            immunocompromised patients in hospitals or in infants (Pepperell et
            al., Antimicrob Agents Chemother. 2002 Nov;46(11):3555-60. and
            references therein).
            
            The strain of Citrobacter koseri being sequenced, strain CDC
            4225-83, was isolated in 1983 in Maryland, where it caused neonatal
            meningitis. It was provided by Caroline Mohr and Melissa Campbell
            of CDC. The strain is available from the American Type Culture
            Collection as ATCC BAA-895 or from the Salmonella Genetic Stock
            Centre as SGSC4696. The genome was sequenced to 8X coverage, using
            plasmid and fosmid libraries and was finished to an error rate of
            less than 1 per 10,000 bases. Automated annotation was performed
            and manual annotation will continue in the labs of Michael
            McClelland and Kenneth Sanderson. The National Institute of Allergy
            and Infectious Diseases (NIAID), National Institutes of Health
            (NIH) has funded this project.
            
            Coding sequences below are predicted using GeneMark v3.3 and
            Glimmer2 v2.13.Intergenic regions not spanned by GeneMark and
            Glimmer2 were blasted against NCBI's non-redundant (NR) database
            and predictions generated based on protein alignments. RNA genes
            were determined usingtRNAscan-SE 1.23 or Rfam v8.0. This sequence
            was finished as follows unless otherwise noted: all regions were
            double stranded, sequenced with an alternate chemistries or covered
            by high quality data (i.e., phred quality >=30); an attempt was
            made to resolve all sequencing problems, such as compressions and
            repeats; all regions were covered by sequence from more than one
            m13 subclone.
FEATURES             Qualifiers
     source          /organism="Citrobacter koseri ATCC BAA-895"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-895"
                     /db_xref="ATCC:BAA-895"
                     /db_xref="taxon:290338"
     protein         /locus_tag="CKO_01301"
                     /inference="protein motif:HMMPfam:IPR006656"
                     /inference="protein motif:HMMPfam:IPR006657"
                     /inference="protein motif:HMMPfam:IPR006963"
                     /inference="protein motif:HMMTigr:IPR006468"
                     /inference="protein motif:ScanRegExp:IPR006655"
                     /inference="protein motif:superfamily:IPR009010"
                     /note="KEGG: spt:SPA1109 0. narG; respiratory nitrate
                     reductase 1 alpha chain K00370; COG: COG5013 Nitrate
                     reductase alpha subunit"
                     /transl_table=11
                     /db_xref="InterPro:IPR006468"
                     /db_xref="InterPro:IPR006655"
                     /db_xref="InterPro:IPR006656"
                     /db_xref="InterPro:IPR006657"
                     /db_xref="InterPro:IPR006963"
                     /db_xref="InterPro:IPR009010"
BEGIN
        1 MSKFLDRFRY FKQKGETFAD GHGQLLETNR DWEDGYRQRW QHDKVVRSTH GVNCTGSCSW
       61 KIYVKNGLVT WETQQTDYPR TRPDMPNHEP RGCPRGASYS WYLYSANRLK YPLMRKRLMK
      121 MWRDAKKLHS DPVEAWASII EDADKAKSFK QARGRGGFVR SSWQEVNELI AASNVYTIKN
      181 YGPDRVAGFS PIPAMSMVSY ASGARYLSLI GGTCLSFYDW YCDLPPASPQ TWGEQTDVPE
      241 SADWYNSSYI IAWGSNVPQT RTPDAHFFTE VRYKGTKTVA VTPDYAEIAK LCDLWLAPKQ
      301 GTDAAMALAM GHVMLREFHL DNPSQYFTDY VRRYTDMPML VMLEERDGYY AAGRMLRAAD
      361 LIDALGQENN PEWKTVAINT RGDMVAPNGS IGFRWGEKGK WNLEQRDGTS GEETELQLSL
      421 LGSQDDIAEV GFPYFGGEGT EHFNKVELQN VLLHKLPVKR LQLADGTTAL VTTVYDLTMA
      481 NYGLERGLND ENCATSYDDI KAYTPAWAEQ ITGVPRAQIT RIAREFADNA DKTHGRSMII
      541 VGAGLNHWYH LDMNYRGLIN MLVFCGCIGQ SGGGWAHYVG QEKLRPQTGW QPLAFALDWQ
      601 RPARHMNSTS YFYNHSSQWR YETVTAQELL SPMADKSRYS GHLIDFNVRA ERMGWLPSAP
      661 QLGTNPLYIA REAEKAGMTA VDYTVKSLKE GSIRFAAEQP ENGKNHPRNL FIWRSNLLGS
      721 SGKGHEYMLK YLLGTENGIQ GKDLGMQGGV KPEEVEWQDN GLDGKLDLVV TLDFRLSSTC
      781 LYSDIVLPTA TWYEKDDMNT SDMHPFIHPL SAAVDPAWES KSDWEIYKGI AKKFSEVCVG
      841 HLGKETDVVT LPIQHDSAAE LAQPLDVKDW KKGECDLIPG KTAPHIIPVE RDYPATYERF
      901 TSIGPLMEKI GNGGKGIAWN TQSEMDLLRK LNYTKAEGPA KGQPMLNTAI DAAEMILTLA
      961 PETNGHVAVK AWAALSEFTG RDHTHLATNK EEEKIRFRDI QAQPRKIISS PTWSGLEDEH
     1021 VSYNAGYTNV HELIPWRTLS GRQSLYQDHQ WMRDFGESLL VYRPPIDTRS VKAVMGEKSN
     1081 GNPEKALNFL TPHQKWGIHS TYSDNLLMLT LSRGGPIVWM SETDAKDLGI EDNDWIEVFN
     1141 SNGALTARAV VSQRVPAGMT MMYHAQERIV NLPGSEITQQ RGGIHNSVTR ITPKPTHMIG
     1201 GYAQLAYGFN YYGTVGSNRD EFVVVRKMKN INWLDGEGND QVQESVK
//