LOCUS       ABV11357.1               729 aa    PRT              BCT 31-JAN-2014
DEFINITION  Citrobacter koseri ATCC BAA-895 hypothetical protein protein.
ACCESSION   CP000822-178
PROTEIN_ID  ABV11357.1
SOURCE      Citrobacter koseri ATCC BAA-895
  ORGANISM  Citrobacter koseri ATCC BAA-895
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 4720462)
  AUTHORS   McClelland,M., Sanderson,E.K., Porwollik,S., Spieth,J.,
            Clifton,W.S., Latreille,P., Courtney,L., Wang,C., Pepin,K.,
            Bhonagiri,V., Nash,W., Johnson,M., Thiruvilangam,P. and Wilson,R.
  CONSRTM   The Citrobacter koseri Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-AUG-2007) Genetics, Genome Sequencing Center, 4444
            Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT     Citrobacter (diversus) koseri--Citrobacter cells are isolated from
            water, sewage, soils, and food, as well as from the feces of man
            and other animals, where they may be normal inhabitants. They can
            be found in urine, sputum, and other clinical specimens. They can
            sometimes be opportunistic pathogens particularly in
            immunocompromised patients in hospitals or in infants (Pepperell et
            al., Antimicrob Agents Chemother. 2002 Nov;46(11):3555-60. and
            references therein).
            
            The strain of Citrobacter koseri being sequenced, strain CDC
            4225-83, was isolated in 1983 in Maryland, where it caused neonatal
            meningitis. It was provided by Caroline Mohr and Melissa Campbell
            of CDC. The strain is available from the American Type Culture
            Collection as ATCC BAA-895 or from the Salmonella Genetic Stock
            Centre as SGSC4696. The genome was sequenced to 8X coverage, using
            plasmid and fosmid libraries and was finished to an error rate of
            less than 1 per 10,000 bases. Automated annotation was performed
            and manual annotation will continue in the labs of Michael
            McClelland and Kenneth Sanderson. The National Institute of Allergy
            and Infectious Diseases (NIAID), National Institutes of Health
            (NIH) has funded this project.
            
            Coding sequences below are predicted using GeneMark v3.3 and
            Glimmer2 v2.13.Intergenic regions not spanned by GeneMark and
            Glimmer2 were blasted against NCBI's non-redundant (NR) database
            and predictions generated based on protein alignments. RNA genes
            were determined usingtRNAscan-SE 1.23 or Rfam v8.0. This sequence
            was finished as follows unless otherwise noted: all regions were
            double stranded, sequenced with an alternate chemistries or covered
            by high quality data (i.e., phred quality >=30); an attempt was
            made to resolve all sequencing problems, such as compressions and
            repeats; all regions were covered by sequence from more than one
            m13 subclone.
FEATURES             Qualifiers
     source          /organism="Citrobacter koseri ATCC BAA-895"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-895"
                     /db_xref="ATCC:BAA-895"
                     /db_xref="taxon:290338"
     protein         /locus_tag="CKO_00188"
                     /inference="protein motif:Gene3D:IPR006108"
                     /inference="protein motif:HMMPfam:IPR001753"
                     /inference="protein motif:HMMPfam:IPR006108"
                     /inference="protein motif:HMMPfam:IPR006176"
                     /inference="protein motif:HMMTigr:IPR012799"
                     /inference="protein motif:ScanRegExp:IPR001753"
                     /inference="protein motif:ScanRegExp:IPR006180"
                     /inference="protein motif:superfamily:IPR008927"
                     /note="KEGG: stm:STM3983 0. fadB; enoyl-CoA hydratase /
                     dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA
                     dehydrogenase / 3-hydroxybutyryl-CoA epimerase
                     K00022:K01692:K01782:K01825; COG: COG1250
                     3-hydroxyacyl-CoA dehydrogenase"
                     /transl_table=11
                     /db_xref="InterPro:IPR001753"
                     /db_xref="InterPro:IPR006108"
                     /db_xref="InterPro:IPR006176"
                     /db_xref="InterPro:IPR006180"
                     /db_xref="InterPro:IPR008927"
                     /db_xref="InterPro:IPR012799"
BEGIN
        1 MLYKGDTLYL DWLEDGIAEL VFDAPGSVNK LDTATVASLG QALDVLEKQT DLKGLLLRSN
       61 KAAFIVGADI TEFLSLFLVP EEQLSQWLHF ANSVFNRLED LPVPTLSAIN GYALGGGCEC
      121 VLATDYRLVT PDLRIGLPET KLGIMPGFGG SVRMPRMLGA DSALEIIAAG KDIGAEQALK
      181 IGLVDGVVKP EKLLDGAIAV LRQAIDGSLD WKAKRQPKLE PLKLSKIEAA MSFTIAKGMV
      241 AQTAGKHYPA PMIAVKTIEA AARFGREEAL NLENKSFVPL AHTNEARALV GIFLNDQFVK
      301 GKAKKLTKDV ETPKQAAVLG AGIMGGGIAY QSAWKGVPVI MKDINDKSLT LGMTEAAKLL
      361 NKQLERGRID GLKLAGVIST IHPTLNYAGF DRVDVVVEAV VENPKVKKAV LAETEDNVRP
      421 DTVLASNTST IPISELASAL KRPENFCGMH FFNPVHRMPL VEIIRGEKSS DETIAKVVAW
      481 ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF SQLLRDGADF RKVDKVMEKQ FGWPMGPAYL
      541 LDVVGIDTAH HAQAVMAAGF PQRMQKDYRD AIDALFDASR YGQKNGLGFW RYKEDSKGKP
      601 KKEEDAAVDS LLAEVSQPKR DFSDEEIIAR MMIPMVNEVV RCLEEGIIAS PAEADMALVY
      661 GLGFPPFHGG AFRWLDTLGS AKYLDMAQQY QHLGPLYEVP EGLRNKARHN EPYYPPVEPA
      721 RPVGDLKTA
//