LOCUS       ABU74393.1              1620 aa    PRT              BCT 25-AUG-2017
DEFINITION  Vibrio campbellii ATCC BAA-1116 hypothetical protein protein.
ACCESSION   CP000790-1762
PROTEIN_ID  ABU74393.1
SOURCE      Vibrio campbellii ATCC BAA-1116
  ORGANISM  Vibrio campbellii ATCC BAA-1116
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 2204018)
  AUTHORS   Bassler,B., Clifton,S.W., Fulton,L., Delehaunty,K., Fronick,C.,
            Harrison,M., Markivic,C., Fulton,R., Tin-Wollam,A.-M., Shah,N.,
            Pepin,K., Nash,W., Thiruvilangam,P., Bhonagiri,V., Waters,C.,
            Tu,K.C., Irgon,J. and Wilson,R.K.
  CONSRTM   The Vibrio harveyi Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2007) Genetics, Genome Sequencing Center, 4444
            Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT     Vibrio harveyi belongs to the group of bioluminescent bacteria that
            'glow in the dark,' just as the commonly known firefly. Based on
            their 16S  ribosomal RNA (rRNA) classification, they belong to the
            group of bacteria known as Proteobacteria, which is further
            sub-divided into five groups, including the gamma proteobacteria.
            This group includes many families, one of which is the Vibrionaceae
            (bioluminescent bacteria). One of the Vibrios is a human pathogen
            and causes cholera. Vibrio harveyi can be found globally in marine
            environments, either in a free-living state or in symbiosis with
            marine life.  The sequenced strain is BB120, ATCC BAA-1116
            http://www.atcc.org/common/catalog/numSearch/numResults.cfm
            Sequence/Assembly
            The genome of Vibrio harveyi was sequenced to 8X coverage using a
            combination of plasmid and fosmid end sequences. Additional 454
            sequence reads bring the present coverage to 10.8X. Assembly was
            performed using the PCAP software (Genome Res. 13(9):2164-70 2003).
            The genome has  undergone automated sequence improvement
            (pre-finishing) followed by  manual finishing, and automated
            annotation. The National Science  Foundation (NSF) is providing
            funding for the complete sequence of the  Vibrio harveyi genome.
            
            Annotation
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. RNA genes were determined
            using tRNAscan-SE 1.23 or Rfam v8.0. Gene names are generated at
            the contig level and may not necessarily reflect any known order or
            orientation between contigs.For questions regarding this assembly
            or project, please visit the Vibrio harveyi genome page
            (http://genome.wustl.edu/genome.cgi?GENOME=Vibrio%20harveyi) and
            choose the designated contact person.
FEATURES             Qualifiers
     source          /organism="Vibrio campbellii ATCC BAA-1116"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-1116; BB120"
                     /db_xref="ATCC:BAA-1116"
                     /db_xref="taxon:2902295"
                     /chromosome="II"
     protein         /locus_tag="VIBHAR_06502"
                     /inference="protein motif:HMMSmart:IPR003593"
                     /note="KEGG: cal:orf19.6148 6.1e-06 USO2; intracellular
                     protein transport K01553; COG: NOG04015 non supervised
                     orthologous group"
                     /transl_table=11
                     /db_xref="InterPro:IPR003593"
BEGIN
        1 MSDMTQKAVS DAGAYDVLKT RLLQQGSQLK SLSQSFNQQR QETFGGQDFK LIGKVNVQTD
       61 AKCIPIDMAQ VNQHLLFGYH VQVGMKATPS LDDVFGLYHL HENEGTFRVE PLPLESSFLS
      121 DSRFTHELTE LFTYYRDAKL SQISRQESTL YIAFQIGMRP EDRKVFRFQI NAHSIEYIDS
      181 LGQNALTSVP QHDFDWIPTT RDDHVLGDHP HVSIQDKLFV ECVGGDLTIK VEDNTKDGKG
      241 IYREDVEDPH QSVADAHIDY AFVGDLIALR VKPNREKHAR YFLYNSVTQS VVRADALEGS
      301 AKTLPEDHGV LYANGYVLSN GEDKQFAFDA DQLKFFQQIT SPNGEDILYI FFNAVEGYYI
      361 AYTYNLIEKK FEAPMESYGY SLYPDGRWLV FQLSENEEAS TIHPMRIWDT PFSTPEHYAK
      421 VNAQTQGSSP LFNLGNTELV RALSSVLSIC QLAQSEEVTQ AAYEVLIKQC RSTLDHYTWL
      481 NHDYACGIGS AINELMGTTD KIIDEFAKVQ QLQKHASSSL DQQKLAVSEL IGKIKLTPKE
      541 QANTLLSLLS EVKGQVGVTM SLRQQHYIDE VQVDRLLEEL QAQRESLNLH LLTLLQDKKV
      601 YVPFKKQIQK IELQLEEVTK TAEIQKLNEE VETLRHELQI VTEEVTDIET EDPTQATRIL
      661 DLTTEVTSLL NTVSAKLRAK SQSLQSEEAQ AEFSAQFKLL SQSVSSAMEQ ALTPDDCDTQ
      721 LAKLVGQLDK LESRFADFDQ FLSEIYSKRD EIQSTLDNHK QQLIAGQQRR VQNLLQAANV
      781 TMSSIEKRVE RFDDVAGLNS YFATDAMVLK LQQLSQTIRE LGDSVKADSV DSKLKSLQDQ
      841 SLRALRDNQD IFEKGGTVLR LGKHRFSVNQ QPLDLSLVDQ SGELALHISG TDFYQAVEDK
      901 AFLDLQTVSR LDVASESEEV YRAEYLAYLI LHQASINQDG QSLDKLYDAL RENKLNELVQ
      961 RFAAPRYREG YVKGIHDHDA VNILRKVLPV YQQAGLLRYS QTARSKAILW LLEQDADQIG
     1021 HYQQQAQNAK LLREHLNASQ AYQELQKQLV DSLNDDQYEA ADYLAQLLSG QDWQIEVSQD
     1081 SLSLCEDYLQ FRRSLGWQPQ PLSFTESFSD HHQWLSAYTA KKQYGQAFVC EAATVAVVNT
     1141 LSEKRLASVD FSLVCHVEGL LGEHTRISKG SLELVLDDFI QRNEHHRSSV VPNFEAYLSQ
     1201 RAQLLSSAKE DFRLSEFKPR PLTSFVRNKL ISESYLPLIG DNFAKQMGTL GDKKRTDLMG
     1261 MLLLISPPGY GKTTLIEYIA HKLGLVFMKI NGPSIGHQAT SLDPADAPDQ NAAREIEKIN
     1321 LAFEMGNNVL LYLDDIQHTH PEFLQKFISL CDGTRRIEGT WKGKTKTYDM RGKKFAVVMA
     1381 GNPYTESGEA FRIPDMLANR ADIYNLGDML SDQKSIFDLS FIENSLTSNN VLAPLATRDL
     1441 NDLYRFVRMA EGESIALSEM SHSYSAIESG EIVTTLQKLI MAQQIVLKVN QQYIKSAATA
     1501 DQYRVEPPFK LQGSYRNMNK LAEKISSVMT DQEMNTLLQD HYQGEAQTLA AGTEENLLKL
     1561 AELRGDMTDE QQARWSEIKE GYQRQQMMGD SEDRAGQVVQ QLAMLNQHVA RFGRHDQEGS
//